FFCP PHASE1:Hg19::chr12:54332687..54332701,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3229 | |EntrezGene=3229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5125 | |HGNC=5125 | ||
|TSSclassifier=strong | |||
|UniProt=P31276 | |UniProt=P31276 | ||
|association_with_transcript=111bp_to_NM_017410,uc001sei.2,uc010sop.1_5end | |association_with_transcript=111bp_to_NM_017410,uc001sei.2,uc010sop.1_5end | ||
|cluster_id=chr12:54332687..54332701,+ | |||
|coexpression_cluster_id=C2216 | |||
|description=CAGE_peak_3_at_HOXC13_5end | |description=CAGE_peak_3_at_HOXC13_5end | ||
|id=chr12:54332687..54332701,+ | |id=chr12:54332687..54332701,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.88e-15!254;CL:0000076!3.09e-14!62;CL:0002327!1.07e-08!4;CL:0002251!1.19e-08!21;CL:0000077!2.65e-08!19;CL:0002150!2.49e-07!3;CL:0000861!2.49e-07!3;CL:0000150!6.44e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.88e-15!254;CL:0000076!3.09e-14!62;CL:0002327!1.07e-08!4;CL:0002251!1.19e-08!21;CL:0000077!2.65e-08!19;CL:0002150!2.49e-07!3;CL:0000861!2.49e-07!3;CL:0000150!6.44e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000515;1.43e-14;3!CL:0000056;4.78e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,4.63e-11,4;CL:0000066,3.19e-09,253;CL:0000076,8.41e-08,63 | |||
|ontology_enrichment_development_v019=CL:0000515;4.78e-11;4 | |||
|ontology_enrichment_disease=DOID:0050687!7.19e-25!143;DOID:162!3.54e-24!235;DOID:14566!2.83e-23!239;DOID:305!5.03e-21!106;DOID:1749!1.04e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.99e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.62e-14,106;DOID:0050687,1.84e-12,143;DOID:162,1.82e-11,235;DOID:14566,4.38e-11,239;DOID:1749,7.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.42e-18!9;UBERON:0001557!5.39e-13!19;UBERON:0001911!1.07e-08!4;UBERON:0005333!1.07e-08!4;UBERON:0008425!1.07e-08!4;UBERON:0005311!1.07e-08!4;UBERON:0003343!2.43e-08!4;UBERON:0004785!2.43e-08!4;UBERON:0000344!9.46e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.37e-23;9!UBERON:0001557;4.37e-23;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.70e-23,9;UBERON:0001557,1.05e-13,19 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01121560067735,0.842923450390509,1.68707720918437,2.75734931830985,2.39667388501647,2.37270619111097,1.07865046528132,0.784885860501384,1.53898862778556,0,0,0,0,0,0,0,0,0.245976877086227,0,1.42675371031213,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.806026704325635,0.581267877027924,1.53353071666084,0,0,0,0.144119953416961,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17171960001369,3.90405012845728,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,13.8871292465715,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80025734630388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,8.48361999963098,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,13.9423744278603,0,0,0.23056390438806,0.448788222048861,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,1.35291077473043,1.24425829676697,0,0,0,1.19472429772959,0,0.138674673013139,0,1.86185555087318,0.261177619741208,0,0,1.9351266257817,3.50828722013691,2.29923279748986,0,0,0,0,0.19871461170299,0,3.12882212375685,0,0,7.99238438328521,0.72045208577053,0.114536596165916,0,0,0,0.471388069233591,0.135904206073614,0.209205692624666,5.30390731708873,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,12.4110834411728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,4.53411851024545,6.01958433241968,0.734210113519403,1.61179956973339,0.308801447160972,0.219284049578707,0,0,0,0,0.690860683462397,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.11796972334774,5.86971515269373,3.11919298605913,0,0.690359926060101,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,1.74362138052188,1.21700790611806,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,0,0.481448200135009,0,0,0,9.46629373159108,0,0,0.5290268405154,0,0,0,0,0,0,0,0,2.02168778976659,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01121560067735,0.842923450390509,1.68707720918437,2.75734931830985,2.39667388501647,2.37270619111097,1.07865046528132,0.784885860501384,1.53898862778556,0,0,0,0,0,0,0,0,0.245976877086227,0,1.42675371031213,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.806026704325635,0.581267877027924,1.53353071666084,0,0,0,0.144119953416961,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17171960001369,3.90405012845728,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,13.8871292465715,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80025734630388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,8.48361999963098,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,13.9423744278603,0,0,0.23056390438806,0.448788222048861,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,1.35291077473043,1.24425829676697,0,0,0,1.19472429772959,0,0.138674673013139,0,1.86185555087318,0.261177619741208,0,0,1.9351266257817,3.50828722013691,2.29923279748986,0,0,0,0,0.19871461170299,0,3.12882212375685,0,0,7.99238438328521,0.72045208577053,0.114536596165916,0,0,0,0.471388069233591,0.135904206073614,0.209205692624666,5.30390731708873,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,12.4110834411728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,4.53411851024545,6.01958433241968,0.734210113519403,1.61179956973339,0.308801447160972,0.219284049578707,0,0,0,0,0.690860683462397,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.11796972334774,5.86971515269373,3.11919298605913,0,0.690359926060101,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,1.74362138052188,1.21700790611806,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,0,0.481448200135009,0,0,0,9.46629373159108,0,0,0.5290268405154,0,0,0,0,0,0,0,0,2.02168778976659,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p3@HOXC13 | |short_description=p3@HOXC13 | ||
}} | }} |
Latest revision as of 04:03, 19 September 2015
Short description: | p3@HOXC13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXC13_5end |
Coexpression cluster: | C2216_keratoacanthoma_cervical_synovial_Wilms_gastric_oral_mesothelioma |
Association with transcript: | 111bp_to_NM_017410, uc001sei.2, uc010sop.1_5end |
EntrezGene: | HOXC13 |
HGNC: | 5125 |
UniProt: | P31276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 4.63e-11 | 4 |
epithelial cell | 3.19e-09 | 253 |
squamous epithelial cell | 8.41e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.70e-23 | 9 |
upper respiratory tract | 1.05e-13 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.62e-14 | 106 |
cell type cancer | 1.84e-12 | 143 |
cancer | 1.82e-11 | 235 |
disease of cellular proliferation | 4.38e-11 | 239 |
squamous cell carcinoma | 7.15e-08 | 14 |