FFCP PHASE1:Hg19::chr2:196521879..196521894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |EntrezGene=57181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |HGNC=20861 | ||
|TSSclassifier=strong | |||
|UniProt=B4DGU0 | |UniProt=B4DGU0 | ||
|association_with_transcript=-17bp_to_ENST00000541054_5end | |association_with_transcript=-17bp_to_ENST00000541054_5end | ||
|cluster_id=chr2:196521879..196521894,+ | |||
|coexpression_cluster_id=C4164 | |coexpression_cluster_id=C4164 | ||
|description=CAGE_peak_4_at_SLC39A10_5end | |description=CAGE_peak_4_at_SLC39A10_5end | ||
|id=chr2:196521879..196521894,+ | |id=chr2:196521879..196521894,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.58e-07!31 | |ontology_enrichment_disease=DOID:8692!5.58e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.81e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.88e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.51e-09!22;UBERON:0001869!1.08e-08!32;UBERON:0001950!1.53e-08!20;UBERON:0002020!4.52e-08!34;UBERON:0003528!4.52e-08!34;UBERON:0001893!7.16e-08!34;UBERON:0000956!8.73e-08!25;UBERON:0000203!8.73e-08!25;UBERON:0001737!1.86e-07!9;UBERON:0002791!2.39e-07!33 | |ontology_enrichment_uberon=UBERON:0002619!2.51e-09!22;UBERON:0001869!1.08e-08!32;UBERON:0001950!1.53e-08!20;UBERON:0002020!4.52e-08!34;UBERON:0003528!4.52e-08!34;UBERON:0001893!7.16e-08!34;UBERON:0000956!8.73e-08!25;UBERON:0000203!8.73e-08!25;UBERON:0001737!1.86e-07!9;UBERON:0002791!2.39e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.14e-10;22!UBERON:0001950;2.64e-09;20!UBERON:0000956;1.53e-08;25!UBERON:0000203;1.53e-08;25!UBERON:0001737;1.56e-08;9!UBERON:0001557;1.56e-08;9!UBERON:0001869;6.20e-08;32!UBERON:0003528;2.74e-07;34!UBERON:0002020;2.74e-07;34!UBERON:0001893;3.02e-07;34!UBERON:0002791;5.78e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.41e-10,22;UBERON:0001950,3.58e-09,20;UBERON:0001869,8.05e-09,32;UBERON:0001737,1.99e-08,9;UBERON:0000956,2.53e-08,25;UBERON:0000203,2.53e-08,25;UBERON:0003528,2.78e-08,34;UBERON:0002020,2.78e-08,34;UBERON:0001893,1.06e-07,34;UBERON:0002791,1.21e-07,32 | |||
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| ||
|short_description=p4@SLC39A10 | |short_description=p4@SLC39A10 | ||
}} | }} |
Latest revision as of 06:10, 19 September 2015
Short description: | p4@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC39A10_5end |
Coexpression cluster: | C4164_medial_amygdala_frontal_Mast_Hep2_paracentral_parietal |
Association with transcript: | -17bp_to_ENST00000541054_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | B4DGU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.41e-10 | 22 |
neocortex | 3.58e-09 | 20 |
cerebral hemisphere | 8.05e-09 | 32 |
larynx | 1.99e-08 | 9 |
cerebral cortex | 2.53e-08 | 25 |
pallium | 2.53e-08 | 25 |
brain grey matter | 2.78e-08 | 34 |
gray matter | 2.78e-08 | 34 |
telencephalon | 1.06e-07 | 34 |
regional part of telencephalon | 1.21e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.88e-07 | 31 |