FFCP PHASE1:Hg19::chr22:22707260..22707265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5925 | |HGNC=5925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000390293_5end | |association_with_transcript=-23bp_to_ENST00000390293_5end | ||
|cluster_id=chr22:22707260..22707265,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_1_at_IGLV5-48_5end | |description=CAGE_peak_1_at_IGLV5-48_5end | ||
|id=chr22:22707260..22707265,+ | |id=chr22:22707260..22707265,+ | ||
|ontology_enrichment_celltype=CL:0000236!4.29e-39!14;CL:0000945!2.42e-29!24;CL:0000826!2.42e-29!24;CL:0000838!9.85e-12!52;CL:0000542!1.89e-11!53;CL:0000051!1.89e-11!53 | |ontology_enrichment_celltype=CL:0000236!4.29e-39!14;CL:0000945!2.42e-29!24;CL:0000826!2.42e-29!24;CL:0000838!9.85e-12!52;CL:0000542!1.89e-11!53;CL:0000051!1.89e-11!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.74e-73;13!CL:0000945;5.01e-39;24!CL:0000542;5.10e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.56e-68,14;CL:0000945,4.66e-39,24;CL:0000826,4.66e-39,24;CL:0000838,4.69e-17,52;CL:0000542,1.07e-16,53;CL:0000051,1.07e-16,53 | |||
|ontology_enrichment_development_v019=CL:0000051;5.10e-14;53!UBERON:0006298;1.21e-09;1!UBERON:0008801;4.32e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.05e-22!115;UBERON:0003408!2.73e-09!10;UBERON:0001829!5.42e-09!2;UBERON:0004177!1.32e-08!7 | |ontology_enrichment_uberon=UBERON:0007023!5.05e-22!115;UBERON:0003408!2.73e-09!10;UBERON:0001829!5.42e-09!2;UBERON:0004177!1.32e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.28e-17;2!UBERON:0001044;1.34e-12;6!UBERON:0003293;1.34e-12;6!UBERON:0003294;1.34e-12;6!UBERON:0010047;1.34e-12;6!UBERON:0003408;1.34e-12;6!UBERON:0000167;1.34e-12;6!UBERON:0001736;1.21e-09;1!UBERON:0002372;1.56e-09;1!UBERON:0001961;1.56e-09;1!UBERON:0001744;1.56e-09;1!UBERON:0001042;1.56e-09;1!UBERON:0001735;1.56e-09;1!UBERON:0000029;2.35e-09;1!UBERON:0001831;4.32e-09;1!UBERON:0001567;4.32e-09;1!UBERON:0004921;4.24e-07;33!UBERON:0000161;5.83e-07;19!UBERON:0000166;5.83e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.02e-17,2;UBERON:0001044,1.54e-12,6;UBERON:0003293,1.54e-12,6;UBERON:0003294,1.54e-12,6;UBERON:0010047,1.54e-12,6;UBERON:0000167,1.54e-12,6;UBERON:0001736,1.21e-09,1;UBERON:0006298,1.21e-09,1;UBERON:0002372,1.69e-09,1;UBERON:0001961,1.69e-09,1;UBERON:0001744,1.69e-09,1;UBERON:0001735,1.69e-09,1;UBERON:0000029,2.55e-09,1;UBERON:0001831,5.72e-09,1;UBERON:0001567,5.72e-09,1;UBERON:0008801,5.72e-09,1;UBERON:0007023,5.65e-08,114;UBERON:0003408,1.01e-07,10 | |||
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| ||
|short_description=p1@IGLV5-48 | |short_description=p1@IGLV5-48 | ||
}} | }} |
Latest revision as of 07:26, 19 September 2015
Short description: | p1@IGLV5-48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGLV5-48_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -23bp_to_ENST00000390293_5end |
EntrezGene: | NA |
HGNC: | 5925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.56e-68 | 14 |
lymphocyte of B lineage | 4.66e-39 | 24 |
pro-B cell | 4.66e-39 | 24 |
lymphoid lineage restricted progenitor cell | 4.69e-17 | 52 |
lymphocyte | 1.07e-16 | 53 |
common lymphoid progenitor | 1.07e-16 | 53 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.02e-17 | 2 |
saliva-secreting gland | 1.54e-12 | 6 |
gland of oral region | 1.54e-12 | 6 |
gland of foregut | 1.54e-12 | 6 |
oral gland | 1.54e-12 | 6 |
oral cavity | 1.54e-12 | 6 |
submandibular gland | 1.21e-09 | 1 |
submandibular gland primordium | 1.21e-09 | 1 |
tonsil | 1.69e-09 | 1 |
mucosa-associated lymphoid tissue | 1.69e-09 | 1 |
lymphoid tissue | 1.69e-09 | 1 |
tonsillar ring | 1.69e-09 | 1 |
lymph node | 2.55e-09 | 1 |
parotid gland | 5.72e-09 | 1 |
cheek | 5.72e-09 | 1 |
parotid gland primordium | 5.72e-09 | 1 |
adult organism | 5.65e-08 | 114 |
gland of gut | 1.01e-07 | 10 |