FFCP PHASE1:Hg19::chr12:56110318..56110352,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56110318..56110352,+
|short_description=p6@BLOC1S1
|description=CAGE_peak_6_at_BLOC1S1_5end
|association_with_transcript=3bp_to_ENST00000548556_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2647 | |EntrezGene=2647 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4200 | |HGNC=4200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000548556_5end | |||
|cluster_id=chr12:56110318..56110352,+ | |||
|description=CAGE_peak_6_at_BLOC1S1_5end | |||
|id=chr12:56110318..56110352,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.69e-13!679;CL:0000004!6.69e-13!679;CL:0000255!6.69e-13!679;CL:0000012!1.00e-12!682;CL:0000055!2.86e-10!180;CL:0000133!4.97e-10!59;CL:0002319!7.27e-09!25;CL:0000144!2.11e-08!625;CL:0000003!6.02e-08!722;CL:0002371!9.79e-08!591;CL:0000333!1.43e-07!41;CL:0000243!1.81e-07!15;CL:0000125!1.81e-07!15;CL:0000030!1.81e-07!15;CL:0000339!1.81e-07!15;CL:0000221!2.62e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.64e-11;25!CL:0000128;2.02e-10;7!CL:0000126;2.02e-10;7!CL:0000127;2.02e-10;7!CL:0000540;2.65e-08;6!CL:0000404;2.65e-08;6!CL:0000243;2.90e-08;15!CL:0000125;2.90e-08;15!CL:0000095;4.29e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.70e-11,25;CL:0000128,3.22e-10,7;CL:0000126,3.22e-10,7;CL:0000127,3.22e-10,7;CL:0002453,3.22e-10,7;CL:0000133,3.33e-09,59;CL:0000540,1.10e-08,6;CL:0000031,1.10e-08,6;CL:0000404,1.10e-08,6;CL:0000243,3.11e-08,15;CL:0000125,3.11e-08,15;CL:0000030,3.11e-08,15;CL:0000339,3.11e-08,15;CL:0000095,4.54e-07,17;CL:0000123,4.54e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;2.65e-08;6!CL:0000339;2.90e-08;15 | |||
|ontology_enrichment_disease=DOID:14566!3.07e-08!239;DOID:162!4.13e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000019!5.13e-07!19;UBERON:0000047!5.13e-07!19;UBERON:0004088!5.13e-07!19;UBERON:0003072!5.13e-07!19;UBERON:0003071!5.13e-07!19;UBERON:0004128!5.13e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;8.74e-10;19!UBERON:0000047;8.74e-10;19!UBERON:0004088;8.74e-10;19!UBERON:0010230;8.74e-10;19!UBERON:0000970;4.07e-09;20!UBERON:0002104;1.63e-08;21!UBERON:0001456;1.63e-08;21!UBERON:0000020;1.78e-07;23!UBERON:0001032;5.01e-07;24!UBERON:0004456;5.01e-07;24!UBERON:0007625;5.79e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000019,4.61e-09,20;UBERON:0000047,4.61e-09,20;UBERON:0010312,4.61e-09,20;UBERON:0004088,4.61e-09,20;UBERON:0010230,4.61e-09,20;UBERON:0003072,4.61e-09,20;UBERON:0004128,4.61e-09,20;UBERON:0003071,4.61e-09,20;UBERON:0000970,1.83e-08,21;UBERON:0002104,1.83e-08,21;UBERON:0001456,6.35e-08,22;UBERON:0005085,1.78e-07,31;UBERON:0000020,5.51e-07,24;UBERON:0001032,5.51e-07,24;UBERON:0004456,5.51e-07,24;UBERON:0007625,6.19e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,2.79120467188971,0.655324116390517,0.791300934685361,1.73272894144065,0.994192127183747,0,0.602694528023977,0,0,2.58554221961255,2.04000691244253,2.19418305034661,2.28988789704845,2.32686522623903,3.76627918784408,2.21598876669059,2.62721886239826,2.67616656466509,0.393364276848904,0,0.154816123316076,0,1.204823675113,0,2.40148321798935,0.710846162437108,0.587200878669695,0,0.401088894940283,0,0.447830948479849,0,0,0.872389432677388,0.377875943688809,0.242584061187816,1.16214518452842,0.411167888021826,0.619412741790207,1.1507695692886,1.7931249457037,0.709446689665756,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.797854630486527,0.426224750532694,0.870627715885752,0,0,2.51248665256743,2.08593167368081,0.868755378820466,0.605399502633369,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.855038231223746,0,0.182664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,1.05353633910031,0.393419540227666,0.393010762749165,0,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,1.15282187753108,0.390178042679635,0.657751618414705,1.38175008892924,0.579606171470105,0,0,0,0.906474741580529,0,0,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.639312809217652,1.0843174571537,1.00267582127178,1.15877215168659,0,0.486634870302636,4.15953195521899,1.10864698731282,2.28370442802128,0.392937226493138,0.728590576585084,0.741568885568859,0.324547393654683,0,0.26591592103773,0,0,0,0.596287222100115,0,1.73570250803797,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0.732186172644509,0,0,0.17859945656816,0.673588117878509,0.675668882899933,0,0,0.732806975721629,0,0,0,0.993943903390637,1.39293562831038,0.662045904066094,0.573673241497627,1.06400514659507,0.560677600142307,0,0.24666754841716,1.24484414159907,0.134710672069688,0.653847612453835,0.454072282934794,0,1.64025002283658,0.936480230490962,0,0.896692083310806,1.87895197830024,0.647491777472526,1.82586048712923,0.816616685019573,1.10550885580591,0.309977343527296,0,0,0.910161361938026,0.718618141816238,2.86171393721913,0.750711119231785,0.554128230968366,0.438977620880838,2.75839016219118,0.600952235626387,0.340296549480063,0.179389635688862,0,0.635795703478686,0.300091096084402,0.412210116953756,0,0,0.337552664482532,0.292311015483596,0.252433774244115,0.184099797284599,0.484938170456436,0,0.503760491138201,0.67824236924195,0.57978255948989,0,0.286804595389004,1.58565817968474,0.927708378250397,1.2781333715647,1.24393266018445,0.756962552626885,2.91981887260664,1.56449532329816,0,1.38134921352481,0,0,0.709840800239063,0.674338760312407,0,0.661763836394364,0.435758888184812,0.237270619111097,0.539325232640658,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,2.20731549707325,0.491953754172454,0.686271241194102,0,0,0.703702806881416,0.370353780634118,0.651616610620649,2.07986957055916,1.44331342025273,1.73895607462615,0.117408694235822,0.433099343283221,0.925971025153221,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0,0,0,0,0,0.985143749731331,0,1.53353071666084,0.492663237895943,0.088048434013226,0.414656231081544,0,0.12624243342638,0.380987365753014,0.381988425558278,1.17217447210047,1.71072446022705,0.205654985406647,0.600686115687835,0.285826432630578,0.672786506072164,0,1.24675085895615,0,0,1.690605505112,0.26593811658487,0,4.11531798819427,1.41849132023278,2.39779961114489,0,0,0,0.977208552881205,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.723906533337896,0.61642896765115,0.895304816199478,1.00876629594175,0,0.215627574859517,0.256686072559497,0.508189248444927,0,1.54657762555539,1.34013012267479,1.91381625495949,0,0,0.828831026872071,0.24538298343828,0.500170521059677,1.35632511849868,0.415941723061614,0.713715955188647,0.315404830067869,0.585707074963566,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.955719759148911,0.783204629850962,1.37257369524342,0,0,0,1.81876542867756,1.66435439510497,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0,0,0.771048469013278,0.710246901252508,1.47828880824856,1.03850885836724,2.20799719073923,0.362578348774867,0,0,0.459257792658427,1.27463817604702,0.262248829918848,0.902399225814824,1.15523005656622,3.92174884588428,0,0.211103257785751,0,0.340187410553031,0.863663664408557,0,1.35473218771926,1.00337954770971,1.52925763827023,2.49322802678617,2.0148727924996,0,0.522870902049801,5.12900250232778,1.31205858279882,1.30151357865721,0,0.183138929636687,0.41254749960294,0.574265537996172,0,1.6068392984416,0.870036464629098,1.54048617114644,1.99554777143968,1.92971201478343,1.18162269355101,1.30515024522806,1.10794615640931,0.445160178233687,0,0.19219006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| ||
|short_description=p6@BLOC1S1 | |||
}} | }} |
Latest revision as of 07:56, 19 September 2015
Short description: | p6@BLOC1S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BLOC1S1_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000548556_5end |
EntrezGene: | BLOC1S1 |
HGNC: | 4200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.70e-11 | 25 |
oligodendrocyte | 3.22e-10 | 7 |
macroglial cell | 3.22e-10 | 7 |
astrocyte | 3.22e-10 | 7 |
oligodendrocyte precursor cell | 3.22e-10 | 7 |
neurectodermal cell | 3.33e-09 | 59 |
neuron | 1.10e-08 | 6 |
neuroblast | 1.10e-08 | 6 |
electrically signaling cell | 1.10e-08 | 6 |
glial cell (sensu Vertebrata) | 3.11e-08 | 15 |
glial cell | 3.11e-08 | 15 |
glioblast | 3.11e-08 | 15 |
glioblast (sensu Vertebrata) | 3.11e-08 | 15 |
neuron associated cell | 4.54e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
camera-type eye | 4.61e-09 | 20 |
simple eye | 4.61e-09 | 20 |
immature eye | 4.61e-09 | 20 |
ocular region | 4.61e-09 | 20 |
eyeball of camera-type eye | 4.61e-09 | 20 |
optic cup | 4.61e-09 | 20 |
optic vesicle | 4.61e-09 | 20 |
eye primordium | 4.61e-09 | 20 |
eye | 1.83e-08 | 21 |
visual system | 1.83e-08 | 21 |
face | 6.35e-08 | 22 |
ectodermal placode | 1.78e-07 | 31 |
sense organ | 5.51e-07 | 24 |
sensory system | 5.51e-07 | 24 |
entire sense organ system | 5.51e-07 | 24 |
pigment epithelium of eye | 6.19e-07 | 11 |