FFCP PHASE1:Hg19::chr18:3262556..3262592,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:3262556..3262592,+ to FFCP PHASE1:Hg19::chr18:3262556..3262592,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=103910 | |EntrezGene=103910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29827 | |HGNC=29827 | ||
|TSSclassifier=strong | |||
|UniProt=O14950 | |UniProt=O14950 | ||
|association_with_transcript=-18bp_to_ENST00000400175,NM_001144944,uc010dkl.2_5end | |||
|cluster_id=chr18:3262556..3262592,+ | |||
|description=CAGE_peak_4_at_MYL12B_5end | |||
|id=chr18:3262556..3262592,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.90e-20!254;CL:0000223!5.45e-12!59;CL:0002076!3.33e-10!43;CL:0000076!1.22e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.68e-11;3!CL:0002536;2.31e-08;2!CL:0002076;3.62e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.64e-11,3;CL:0002076,1.24e-09,42;CL:0000066,3.07e-08,253;CL:0002536,4.47e-08,2;CL:0000223,1.46e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.05e-16!106;DOID:0050687!1.75e-12!143;DOID:14566!3.36e-10!239;DOID:162!9.93e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.59e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.77e-09!169;UBERON:0000925!5.77e-09!169;UBERON:0006595!5.77e-09!169;UBERON:0000077!1.48e-08!130;UBERON:0001007!4.66e-08!155;UBERON:0001555!4.66e-08!155;UBERON:0007026!4.66e-08!155;UBERON:0001004!6.64e-08!72;UBERON:0004921!1.82e-07!129;UBERON:0004185!1.82e-07!129;UBERON:0005631!3.91e-07!14;UBERON:0000158!3.91e-07!14;UBERON:0005153!4.07e-07!37;UBERON:0001041!4.15e-07!98;UBERON:0000065!1.00e-06!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.48e-09;10!UBERON:0000158;6.48e-09;10!UBERON:0001708;9.90e-09;4!UBERON:0008895;9.90e-09;4!UBERON:0000305;1.32e-08;7!UBERON:0011159;4.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.57e-09,14;UBERON:0000158,6.57e-09,14;UBERON:0001708,9.73e-09,4;UBERON:0008895,9.73e-09,4;UBERON:0000305,1.73e-08,7;UBERON:0004871,1.99e-07,8;UBERON:0011159,4.57e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0.737201809504527,0,1.09220686065086,2.37390280405608,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0,0.523916301990851,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.201504196455281,0,0.57978255948989,1.09098448236334,1.43402297694502,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0,0.482022059766964,0.772057809126758,1.30727666455444,2.37270619111097,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.122988438543114,0,0.658501712451753,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,2.81201501960331,1.34385702559088,1.27597587518148,0.806026704325635,0.871901815541886,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,1.20575750823834,2.61460037580088,0.499864955910285,0,0,0,0,0,0,0.434343920002738,0,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.768834895534206,0,1.28683136914886,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0.241718899183244,1.20303882181971,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0.770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,1.81813406897076,0.576570202095319,0,1.2138933702666,1.39453664789186,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.659006605437454,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,1.6023610669121,1.92495971052672,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,4.36897878298248,0.111443384277478,0,0.95497793895076,0.296964680832639,1.53580351049616,0,0.140669416410513,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,1.5625665665114,0.0874599999961957,0.724999575434793,0.455173793141999,1.5255219017566,4.96414131712666,0,0,0,0,0,0,0,0.295547618953547,0,0,0.83654246567162,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.274792780205587,1.5991043280559,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.782658475728359,2.18502341580683,0,0,0,0,1.20258735531594,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0.569219092059585,0.554698692052555,1.73559738335131,0.881931576729399,0.609414446062818,0.34945333648406,0.51595809741485,0.387025325156341,0.730893170861856,0.574808199372465,1.45483524732629,1.588610280447,0,0,0.19871461170299,0,1.56441106187842,0.160317640503067,0.640358984218058,0.19980960958213,1.15272333723285,4.35239065430479,0,1.4405479798815,0.124252535565433,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0.858452096273142,0,0,0,0,0.157566364614447,0.0824158583811665,0.337017719270924,0.0984274815147488,0.0846733320657845,0,0,0,0.275078873194468,0.83088067605837,1.1248694577575,0.77380195455795,0,0.335434687599266,0.315222829196793,0.0524545881349981,0.316801009558219,0,2.1110671705139,0,0,1.27134268827375,0,3.45688596480507,0.326587360109409,0,0.082092520749339,0.511164065356265,0,0.439656701034247,2.65013777824443,0.258565912723101,0,0.342173675768659,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0.124980407962107,0.454947352624943,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0.734210113519403,0.179088841081487,0,0.438568099157414,0.176689145945881,0.964570191354574,0.337884881306145,0.256241518587947,0,0.607719912354764,0,0,0.132864840313363,0,0,0.491545817507439,0.422624246717254,0.19998739585493,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0.11796972334774,0.366857197043358,1.27078232765372,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0.894336993477167,0,0,0,0,2.57236873471653,0,0.171488009437418,0.271878931907327,0.197318320688547,0.472775363535873,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0.431855182437243,0,0.0714765441766563,0,0.23248285073625,0,0,0.62164849248911,0,5.53007729451273,0,0,0.170426809518315,0,2.52017555398455,0.31020638566432,0,0.111855431797792,0.098150233615243,1.70685094975177,0,0,1.1598144313382,1.45713297917742,0.233939463462106,0,0,0.11294608203896,0,0.603851374266694,0.540219106755613,0.437119121007915,0,0,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0,0,0.399764623699716,0.357107877211315,2.11736923029415,0.561689566824178,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0.735159196278759,0,1.28823786971007,1.33982065078089,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0,1.27968900727716,0.143444410785353,0.332660356546013,0,0.213454691755431,0,0.359300808426348,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0.737201809504527,0,1.09220686065086,2.37390280405608,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0,0.523916301990851,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.201504196455281,0,0.57978255948989,1.09098448236334,1.43402297694502,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0,0.482022059766964,0.772057809126758,1.30727666455444,2.37270619111097,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.122988438543114,0,0.658501712451753,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,2.81201501960331,1.34385702559088,1.27597587518148,0.806026704325635,0.871901815541886,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,1.20575750823834,2.61460037580088,0.499864955910285,0,0,0,0,0,0,0.434343920002738,0,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.768834895534206,0,1.28683136914886,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0.241718899183244,1.20303882181971,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0.770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,1.81813406897076,0.576570202095319,0,1.2138933702666,1.39453664789186,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.659006605437454,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,1.6023610669121,1.92495971052672,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,4.36897878298248,0.111443384277478,0,0.95497793895076,0.296964680832639,1.53580351049616,0,0.140669416410513,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,1.5625665665114,0.0874599999961957,0.724999575434793,0.455173793141999,1.5255219017566,4.96414131712666,0,0,0,0,0,0,0,0.295547618953547,0,0,0.83654246567162,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.274792780205587,1.5991043280559,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.782658475728359,2.18502341580683,0,0,0,0,1.20258735531594,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0.569219092059585,0.554698692052555,1.73559738335131,0.881931576729399,0.609414446062818,0.34945333648406,0.51595809741485,0.387025325156341,0.730893170861856,0.574808199372465,1.45483524732629,1.588610280447,0,0,0.19871461170299,0,1.56441106187842,0.160317640503067,0.640358984218058,0.19980960958213,1.15272333723285,4.35239065430479,0,1.4405479798815,0.124252535565433,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0.858452096273142,0,0,0,0,0.157566364614447,0.0824158583811665,0.337017719270924,0.0984274815147488,0.0846733320657845,0,0,0,0.275078873194468,0.83088067605837,1.1248694577575,0.77380195455795,0,0.335434687599266,0.315222829196793,0.0524545881349981,0.316801009558219,0,2.1110671705139,0,0,1.27134268827375,0,3.45688596480507,0.326587360109409,0,0.082092520749339,0.511164065356265,0,0.439656701034247,2.65013777824443,0.258565912723101,0,0.342173675768659,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0.124980407962107,0.454947352624943,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0.734210113519403,0.179088841081487,0,0.438568099157414,0.176689145945881,0.964570191354574,0.337884881306145,0.256241518587947,0,0.607719912354764,0,0,0.132864840313363,0,0,0.491545817507439,0.422624246717254,0.19998739585493,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0.11796972334774,0.366857197043358,1.27078232765372,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0.894336993477167,0,0,0,0,2.57236873471653,0,0.171488009437418,0.271878931907327,0.197318320688547,0.472775363535873,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0.431855182437243,0,0.0714765441766563,0,0.23248285073625,0,0,0.62164849248911,0,5.53007729451273,0,0,0.170426809518315,0,2.52017555398455,0.31020638566432,0,0.111855431797792,0.098150233615243,1.70685094975177,0,0,1.1598144313382,1.45713297917742,0.233939463462106,0,0,0.11294608203896,0,0.603851374266694,0.540219106755613,0.437119121007915,0,0,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0,0,0.399764623699716,0.357107877211315,2.11736923029415,0.561689566824178,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0.735159196278759,0,1.28823786971007,1.33982065078089,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0,1.27968900727716,0.143444410785353,0.332660356546013,0,0.213454691755431,0,0.359300808426348,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p4@MYL12B | |||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p4@MYL12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYL12B_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000400175, NM_001144944, uc010dkl.2_5end |
EntrezGene: | MYL12B |
HGNC: | 29827 |
UniProt: | O14950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.64e-11 | 3 |
endo-epithelial cell | 1.24e-09 | 42 |
epithelial cell | 3.07e-08 | 253 |
amniotic epithelial cell | 4.47e-08 | 2 |
endodermal cell | 1.46e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.57e-09 | 14 |
membranous layer | 6.57e-09 | 14 |
jaw skeleton | 9.73e-09 | 4 |
splanchnocranium | 9.73e-09 | 4 |
amnion | 1.73e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.99e-07 | 8 |
primary subdivision of cranial skeletal system | 4.57e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.59e-07 | 106 |