FFCP PHASE1:Hg19::chr19:50391314..50391329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100616314 | |EntrezGene=100616314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=41765 | |HGNC=41765 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_NR_039905_5end | |association_with_transcript=-98bp_to_NR_039905_5end | ||
|cluster_id=chr19:50391314..50391329,+ | |||
|description=CAGE_peak_1_at_MIR4750_5end | |description=CAGE_peak_1_at_MIR4750_5end | ||
|id=chr19:50391314..50391329,+ | |id=chr19:50391314..50391329,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.08e-14!12;CL:1000494!1.08e-14!12;CL:1000449!1.17e-13!16;CL:1000497!6.20e-12!18;CL:0002518!6.20e-12!18;CL:0002681!1.69e-10!13;CL:0002584!1.69e-10!13 | |ontology_enrichment_celltype=CL:1000507!1.08e-14!12;CL:1000494!1.08e-14!12;CL:1000449!1.17e-13!16;CL:1000497!6.20e-12!18;CL:0002518!6.20e-12!18;CL:0002681!1.69e-10!13;CL:0002584!1.69e-10!13 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.61e-13;1!CL:0000167;3.54e-13;1!CL:0000164;3.54e-13;1!CL:0000502;3.54e-13;1!CL:0000172;3.54e-13;1!CL:0000173;3.54e-13;1!CL:0002681;2.07e-09;12!CL:0002584;2.07e-09;12!CL:1000449;1.25e-07;15!CL:0002535;3.18e-07;2!CL:0000123;5.13e-07;2!CL:0000242;5.13e-07;2!CL:1000497;8.68e-07;17!CL:0002518;8.68e-07;17 | |ontology_enrichment_celltype_v019=CL:0002553;1.61e-13;1!CL:0000167;3.54e-13;1!CL:0000164;3.54e-13;1!CL:0000502;3.54e-13;1!CL:0000172;3.54e-13;1!CL:0000173;3.54e-13;1!CL:0002681;2.07e-09;12!CL:0002584;2.07e-09;12!CL:1000449;1.25e-07;15!CL:0002535;3.18e-07;2!CL:0000123;5.13e-07;2!CL:0000242;5.13e-07;2!CL:1000497;8.68e-07;17!CL:0002518;8.68e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.61e-13,1;CL:0000167,2.62e-13,1;CL:0000164,2.62e-13,1;CL:0000502,2.62e-13,1;CL:0000172,2.62e-13,1;CL:0000173,2.62e-13,1;CL:0002351,2.62e-13,1;CL:0002681,2.01e-09,12;CL:0002584,2.01e-09,12;CL:1000449,1.22e-07,15;CL:0002535,2.91e-07,2;CL:0000242,5.28e-07,2;CL:1000497,8.51e-07,17;CL:0002518,8.51e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002351;3.54e-13;1 | |ontology_enrichment_development_v019=CL:0002351;3.54e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;3.54e-13;1!DOID:3493;4.29e-07;2 | |ontology_enrichment_disease_v019=DOID:4430;3.54e-13;1!DOID:3493;4.29e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,2.62e-13,1;DOID:3493,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003887!6.95e-18!21;UBERON:0000080!1.01e-14!18;UBERON:0002120!1.01e-14!18;UBERON:0004875!1.01e-14!18;UBERON:0005721!1.01e-14!18;UBERON:0005754!1.01e-14!18;UBERON:0007297!1.01e-14!18;UBERON:0009773!1.08e-14!12;UBERON:0001231!1.08e-14!12;UBERON:0004810!1.08e-14!12;UBERON:0004211!1.17e-13!16;UBERON:0001285!1.17e-13!16;UBERON:0007684!1.17e-13!16;UBERON:0003220!1.17e-13!16;UBERON:0004208!1.17e-13!16;UBERON:0004876!4.97e-13!20;UBERON:0000489!9.26e-13!32;UBERON:0006555!9.58e-13!17;UBERON:0005103!9.58e-13!17;UBERON:0000083!9.58e-13!17;UBERON:0009201!9.58e-13!17;UBERON:0004819!9.58e-13!17;UBERON:0006553!9.58e-13!17;UBERON:0003074!9.58e-13!17;UBERON:0003060!9.58e-13!17;UBERON:0006554!2.25e-11!44;UBERON:0002113!4.18e-11!27;UBERON:0003918!4.18e-11!27;UBERON:0005095!4.18e-11!27;UBERON:0007687!4.18e-11!27;UBERON:0001008!4.85e-11!45;UBERON:0001225!1.69e-10!13;UBERON:0008987!1.69e-10!13;UBERON:0003064!2.05e-10!37;UBERON:0000058!1.59e-09!26;UBERON:0003886!3.00e-09!63;UBERON:0000464!6.34e-09!104;UBERON:0001851!2.57e-08!16;UBERON:0002553!6.33e-08!70;UBERON:0000353!9.24e-08!17;UBERON:0005177!1.11e-07!107;UBERON:0005172!2.51e-07!55;UBERON:0005173!2.51e-07!55;UBERON:0004177!8.08e-07!7 | |ontology_enrichment_uberon=UBERON:0003887!6.95e-18!21;UBERON:0000080!1.01e-14!18;UBERON:0002120!1.01e-14!18;UBERON:0004875!1.01e-14!18;UBERON:0005721!1.01e-14!18;UBERON:0005754!1.01e-14!18;UBERON:0007297!1.01e-14!18;UBERON:0009773!1.08e-14!12;UBERON:0001231!1.08e-14!12;UBERON:0004810!1.08e-14!12;UBERON:0004211!1.17e-13!16;UBERON:0001285!1.17e-13!16;UBERON:0007684!1.17e-13!16;UBERON:0003220!1.17e-13!16;UBERON:0004208!1.17e-13!16;UBERON:0004876!4.97e-13!20;UBERON:0000489!9.26e-13!32;UBERON:0006555!9.58e-13!17;UBERON:0005103!9.58e-13!17;UBERON:0000083!9.58e-13!17;UBERON:0009201!9.58e-13!17;UBERON:0004819!9.58e-13!17;UBERON:0006553!9.58e-13!17;UBERON:0003074!9.58e-13!17;UBERON:0003060!9.58e-13!17;UBERON:0006554!2.25e-11!44;UBERON:0002113!4.18e-11!27;UBERON:0003918!4.18e-11!27;UBERON:0005095!4.18e-11!27;UBERON:0007687!4.18e-11!27;UBERON:0001008!4.85e-11!45;UBERON:0001225!1.69e-10!13;UBERON:0008987!1.69e-10!13;UBERON:0003064!2.05e-10!37;UBERON:0000058!1.59e-09!26;UBERON:0003886!3.00e-09!63;UBERON:0000464!6.34e-09!104;UBERON:0001851!2.57e-08!16;UBERON:0002553!6.33e-08!70;UBERON:0000353!9.24e-08!17;UBERON:0005177!1.11e-07!107;UBERON:0005172!2.51e-07!55;UBERON:0005173!2.51e-07!55;UBERON:0004177!8.08e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;9.17e-13;1!UBERON:0001225;2.07e-09;12!UBERON:0008987;2.07e-09;12!UBERON:0001851;1.25e-07;15!UBERON:0006555;1.25e-07;15!UBERON:0000353;1.25e-07;15!UBERON:0004819;1.25e-07;15!UBERON:0001285;1.25e-07;15!UBERON:0007684;1.25e-07;15!UBERON:0006955;3.18e-07;2!UBERON:0004801;3.18e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005795;9.17e-13;1!UBERON:0001225;2.07e-09;12!UBERON:0008987;2.07e-09;12!UBERON:0001851;1.25e-07;15!UBERON:0006555;1.25e-07;15!UBERON:0000353;1.25e-07;15!UBERON:0004819;1.25e-07;15!UBERON:0001285;1.25e-07;15!UBERON:0007684;1.25e-07;15!UBERON:0006955;3.18e-07;2!UBERON:0004801;3.18e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,2.01e-09,12;UBERON:0008987,2.01e-09,12;UBERON:0001851,1.22e-07,15;UBERON:0004211,1.22e-07,15;UBERON:0009773,1.22e-07,15;UBERON:0000353,1.22e-07,15;UBERON:0001231,1.22e-07,15;UBERON:0001285,1.22e-07,15;UBERON:0007684,1.22e-07,15;UBERON:0004208,1.22e-07,15;UBERON:0006955,2.91e-07,2;UBERON:0004801,2.91e-07,2;UBERON:0006555,3.42e-07,16;UBERON:0004819,3.42e-07,16;UBERON:0000945,8.12e-07,8;UBERON:0010039,8.12e-07,8 | |||
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| ||
|short_description=p1@MIR4750 | |short_description=p1@MIR4750 | ||
}} | }} |
Latest revision as of 09:42, 19 September 2015
Short description: | p1@MIR4750 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4750_5end |
Coexpression cluster: | NA |
Association with transcript: | -98bp_to_NR_039905_5end |
EntrezGene: | MIR4750 |
HGNC: | 41765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.61e-13 | 1 |
peptide hormone secreting cell | 2.62e-13 | 1 |
enteroendocrine cell | 2.62e-13 | 1 |
type D enteroendocrine cell | 2.62e-13 | 1 |
somatostatin secreting cell | 2.62e-13 | 1 |
pancreatic D cell | 2.62e-13 | 1 |
progenitor cell of endocrine pancreas | 2.62e-13 | 1 |
kidney cortical cell | 2.01e-09 | 12 |
renal cortical epithelial cell | 2.01e-09 | 12 |
epithelial cell of nephron | 1.22e-07 | 15 |
epithelial cell of cervix | 2.91e-07 | 2 |
Merkel cell | 5.28e-07 | 2 |
kidney cell | 8.51e-07 | 17 |
kidney epithelial cell | 8.51e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 2.01e-09 | 12 |
renal parenchyma | 2.01e-09 | 12 |
cortex | 1.22e-07 | 15 |
nephron epithelium | 1.22e-07 | 15 |
renal tubule | 1.22e-07 | 15 |
parenchyma | 1.22e-07 | 15 |
nephron tubule | 1.22e-07 | 15 |
nephron | 1.22e-07 | 15 |
uriniferous tubule | 1.22e-07 | 15 |
nephrogenic mesenchyme | 1.22e-07 | 15 |
uterine epithelium | 2.91e-07 | 2 |
cervix epithelium | 2.91e-07 | 2 |
excretory tube | 3.42e-07 | 16 |
kidney epithelium | 3.42e-07 | 16 |
stomach | 8.12e-07 | 8 |
food storage organ | 8.12e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.62e-13 | 1 |
signet ring cell adenocarcinoma | 4.42e-07 | 2 |