FFCP PHASE1:Hg19::chr17:29297530..29297547,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84282 | |EntrezGene=84282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21158 | |HGNC=21158 | ||
|TSSclassifier=strong | |||
|UniProt=F5GX60,B6ZLM5,Q8IUD6,B2R7G9 | |UniProt=F5GX60,B6ZLM5,Q8IUD6,B2R7G9 | ||
|association_with_transcript=-408bp_to_NM_001184992,NM_032322,NM_197939,uc002hfz.2,uc002hga.2,uc002hgb.2,uc010csm.2_5end | |association_with_transcript=-408bp_to_NM_001184992,NM_032322,NM_197939,uc002hfz.2,uc002hga.2,uc002hgb.2,uc010csm.2_5end | ||
|cluster_id=chr17:29297530..29297547,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_2_at_RNF135_5end | |description=CAGE_peak_2_at_RNF135_5end | ||
|id=chr17:29297530..29297547,+ | |id=chr17:29297530..29297547,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.57e-11!24;CL:0000826!1.57e-11!24;CL:0000236!4.07e-10!14;CL:0002087!5.30e-10!119;CL:0000738!1.19e-09!140;CL:0002031!6.46e-09!124 | |ontology_enrichment_celltype=CL:0000945!1.57e-11!24;CL:0000826!1.57e-11!24;CL:0000236!4.07e-10!14;CL:0002087!5.30e-10!119;CL:0000738!1.19e-09!140;CL:0002031!6.46e-09!124 | ||
|ontology_enrichment_celltype_v019=CL:0000236;8.48e-40;13!CL:0000945;2.86e-28;24!CL:0000039;6.14e-10;7!CL:0000586;6.14e-10;7!CL:0000542;4.35e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.85e-37,14;CL:0000945,4.71e-28,24;CL:0000826,4.71e-28,24;CL:0000838,2.43e-11,52;CL:0000542,4.51e-11,53;CL:0000051,4.51e-11,53;CL:0000039,4.77e-10,7;CL:0000586,4.77e-10,7;CL:0002031,3.42e-08,120;CL:0002087,1.15e-07,115;CL:0000738,9.43e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;4.35e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0,0,0.383829398097213,0.309632246632152,0.919421224478927,0,0.369754010166788,0.542270404062111,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0.872389432677388,1.13362783106643,0.727752183563449,0.697287110717054,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.941211697713023,0,0,0,0,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0,0,0.422510572623884,0.637812899895131,1.04829322754188,0.561643155732475,0.600707571366025,0.803627933485401,1.42506371870624,0.19891667719909,0.182664153764634,7.03984977845291,6.00752472388345,10.6741110463627,4.26730222566507,5.60554381850417,10.9202963591352,5.94940385506376,12.4026988089597,13.6611112586268,10.5702694086769,13.379562984383,0,1.12101712596307,0,0,0,0.205601498999509,0.334372990781356,0.32592226663359,1.4203434172042,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.860413786167011,0.487894824518382,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.55146986366197,1.30727666455444,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0.984868024349589,1.17002132569619,0.148631162288728,0.93733833986777,2.18376766658517,1.13420077793909,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,1.5156378572313,1.66435439510497,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.644566922551274,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0.893288987462089,0.809262246844399,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.211125408127993,0,1.10513566212459,0.503865495708552,0,1.10776324914963,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,1.11136990144637,0,0,0,0,0.787139999965761,0,0.227586896570999,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0.331737779793674,0,0,0.21787692703798,0.557694977114413,0.307801034015188,0,4.15015027898508,1.52587995496613,2.39024218228418,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,1.13843818411917,0,0.173559738335131,0.293977192243133,0.261177619741208,0,0,0,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,1.56441106187842,0,0,0.19980960958213,0,0.80175617316141,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.643012593860077,0.275078873194468,0.83088067605837,0,1.5476039091159,0.0607495566580247,0.670869375198532,1.10327990218877,0.891727998294968,0.105600336519406,0,1.34340638123612,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0.974340787047167,0,0.544017803369474,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0.244736704506468,0,0.617602894321944,0,0,0,0,0.76872455576384,0,0,0,0.389720617678777,0.265729680626726,0.327130788511688,0,0.245772908753719,0,0,0,1.03328987796489,0,0,0.419638523158333,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.366857197043358,0,0,0,0,0.0752103283492573,0.20170506870352,0,3.92860041722134,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.532214220975833,0,0,0,0,0,0.444925607568277,0.235479278551542,0,1.40136081656895,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.644578879735772,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,1.09265571963696,0,2.34574308406558,0.26721740526556,0.459474497674225,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0.193766729508018,0.31037357147929,0,0.318235791390825,1.21270313374932,0.217716747896961,0,1.01028079521881,0.143444410785353,0,1.30245229777559,0.106727345877715,0,0,2.34640942403454,0,0,0,0.603821380773079,0.961705476909699 | |phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0,0,0.383829398097213,0.309632246632152,0.919421224478927,0,0.369754010166788,0.542270404062111,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0.872389432677388,1.13362783106643,0.727752183563449,0.697287110717054,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.941211697713023,0,0,0,0,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0,0,0.422510572623884,0.637812899895131,1.04829322754188,0.561643155732475,0.600707571366025,0.803627933485401,1.42506371870624,0.19891667719909,0.182664153764634,7.03984977845291,6.00752472388345,10.6741110463627,4.26730222566507,5.60554381850417,10.9202963591352,5.94940385506376,12.4026988089597,13.6611112586268,10.5702694086769,13.379562984383,0,1.12101712596307,0,0,0,0.205601498999509,0.334372990781356,0.32592226663359,1.4203434172042,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.860413786167011,0.487894824518382,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.55146986366197,1.30727666455444,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0.984868024349589,1.17002132569619,0.148631162288728,0.93733833986777,2.18376766658517,1.13420077793909,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,1.5156378572313,1.66435439510497,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.644566922551274,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0.893288987462089,0.809262246844399,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.211125408127993,0,1.10513566212459,0.503865495708552,0,1.10776324914963,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,1.11136990144637,0,0,0,0,0.787139999965761,0,0.227586896570999,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0.331737779793674,0,0,0.21787692703798,0.557694977114413,0.307801034015188,0,4.15015027898508,1.52587995496613,2.39024218228418,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,1.13843818411917,0,0.173559738335131,0.293977192243133,0.261177619741208,0,0,0,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,1.56441106187842,0,0,0.19980960958213,0,0.80175617316141,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.643012593860077,0.275078873194468,0.83088067605837,0,1.5476039091159,0.0607495566580247,0.670869375198532,1.10327990218877,0.891727998294968,0.105600336519406,0,1.34340638123612,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0.974340787047167,0,0.544017803369474,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0.244736704506468,0,0.617602894321944,0,0,0,0,0.76872455576384,0,0,0,0.389720617678777,0.265729680626726,0.327130788511688,0,0.245772908753719,0,0,0,1.03328987796489,0,0,0.419638523158333,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.366857197043358,0,0,0,0,0.0752103283492573,0.20170506870352,0,3.92860041722134,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.532214220975833,0,0,0,0,0,0.444925607568277,0.235479278551542,0,1.40136081656895,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.644578879735772,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,1.09265571963696,0,2.34574308406558,0.26721740526556,0.459474497674225,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0.193766729508018,0.31037357147929,0,0.318235791390825,1.21270313374932,0.217716747896961,0,1.01028079521881,0.143444410785353,0,1.30245229777559,0.106727345877715,0,0,2.34640942403454,0,0,0,0.603821380773079,0.961705476909699 | ||
|short_description=p2@RNF135 | |short_description=p2@RNF135 | ||
}} | }} |
Latest revision as of 10:43, 19 September 2015
Short description: | p2@RNF135 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF135_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -408bp_to_NM_001184992, NM_032322, NM_197939, uc002hfz.2, uc002hga.2, uc002hgb.2, uc010csm.2_5end |
EntrezGene: | RNF135 |
HGNC: | 21158 |
UniProt: | F5GX60B6ZLM5Q8IUD6B2R7G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.85e-37 | 14 |
lymphocyte of B lineage | 4.71e-28 | 24 |
pro-B cell | 4.71e-28 | 24 |
lymphoid lineage restricted progenitor cell | 2.43e-11 | 52 |
lymphocyte | 4.51e-11 | 53 |
common lymphoid progenitor | 4.51e-11 | 53 |
germ line cell | 4.77e-10 | 7 |
germ cell | 4.77e-10 | 7 |
hematopoietic lineage restricted progenitor cell | 3.42e-08 | 120 |
nongranular leukocyte | 1.15e-07 | 115 |
leukocyte | 9.43e-07 | 136 |