FFCP PHASE1:Hg19::chr6:100061724..100061753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59336 | |EntrezGene=59336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13998 | |HGNC=13998 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5E7 | |UniProt=Q7Z5E7 | ||
|association_with_transcript=-254bp_to_AY130010_5end | |association_with_transcript=-254bp_to_AY130010_5end | ||
|cluster_id=chr6:100061724..100061753,+ | |||
|description=CAGE_peak_1_at_PRDM13_5end | |description=CAGE_peak_1_at_PRDM13_5end | ||
|id=chr6:100061724..100061753,+ | |id=chr6:100061724..100061753,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.50e-07!7;CL:0000586!1.50e-07!7 | |ontology_enrichment_celltype=CL:0000039!1.50e-07!7;CL:0000586!1.50e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.82e-07;1!CL:0000911;2.82e-07;1!CL:0000814;2.82e-07;1!CL:0000082;3.55e-07;19!CL:0000946;5.21e-07;1!CL:0000786;5.21e-07;1!CL:0002553;9.77e-07;1 | |ontology_enrichment_celltype_v019=CL:0002127;2.82e-07;1!CL:0000911;2.82e-07;1!CL:0000814;2.82e-07;1!CL:0000082;3.55e-07;19!CL:0000946;5.21e-07;1!CL:0000786;5.21e-07;1!CL:0002553;9.77e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.82e-07,1;CL:0000914,2.82e-07,1;CL:0000911,2.82e-07,1;CL:0000814,2.82e-07,1;CL:0002042,2.82e-07,1;CL:0002039,2.82e-07,1;CL:0002040,2.82e-07,1;CL:0002041,2.82e-07,1;CL:0000082,3.43e-07,19;CL:0000946,4.78e-07,1;CL:0000786,4.78e-07,1;CL:0000980,4.78e-07,1;CL:0002553,7.15e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!9.07e-23!235;DOID:14566!6.15e-22!239;DOID:0050687!4.85e-16!143;DOID:305!2.67e-10!106;DOID:0050615!4.59e-10!16;DOID:0050686!1.86e-09!137;DOID:1324!1.08e-08!15;DOID:1325!2.82e-08!7;DOID:3904!2.82e-08!7;DOID:1115!6.08e-07!20 | |ontology_enrichment_disease=DOID:162!9.07e-23!235;DOID:14566!6.15e-22!239;DOID:0050687!4.85e-16!143;DOID:305!2.67e-10!106;DOID:0050615!4.59e-10!16;DOID:0050686!1.86e-09!137;DOID:1324!1.08e-08!15;DOID:1325!2.82e-08!7;DOID:3904!2.82e-08!7;DOID:1115!6.08e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:1324;3.69e-09;15!DOID:0050615;1.43e-08;16!DOID:1325;6.48e-08;7!DOID:3904;6.48e-08;7!DOID:3151;9.77e-07;1!DOID:3149;9.77e-07;1!DOID:225;9.77e-07;1 | |ontology_enrichment_disease_v019=DOID:1324;3.69e-09;15!DOID:0050615;1.43e-08;16!DOID:1325;6.48e-08;7!DOID:3904;6.48e-08;7!DOID:3151;9.77e-07;1!DOID:3149;9.77e-07;1!DOID:225;9.77e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:162,7.89e-11,235;DOID:14566,1.72e-10,239;DOID:1324,3.54e-09,15;DOID:0050615,1.37e-08,16;DOID:0050686,2.36e-08,137;DOID:1325,8.31e-08,7;DOID:3904,8.31e-08,7;DOID:3151,6.76e-07,1;DOID:3149,6.76e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;7.44e-09;10!UBERON:0004802;3.55e-07;19!UBERON:0000115;3.55e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001264;7.44e-09;10!UBERON:0004802;3.55e-07;19!UBERON:0000115;3.55e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,8.63e-09,10;UBERON:0004802,3.43e-07,19;UBERON:0000115,3.43e-07,19;UBERON:0004807,9.81e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38008691168931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47237555009527,2.47528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,3.89546328329467,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.667396566847634,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,6.26254722061686,0,0,0,4.53478946137697,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4034858631195,1.01701460117107,7.8007934983419,3.79217710565611,3.79085997398231,0.347249989866585,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0.227884111694002,0.69169171316418,0,0.434589487688032,0,0,0,0,10.5176771784667,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,1.14057010536972,1.32930774541437,1.323967823502,1.2557316736289,1.19472429772959,0.284609546029793,0,0.173559738335131,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,1.67717343799633,0,0,0,1.79287339332845,0,0,0,0,0,0,0,0,4.18671855821629,0,0.339936274560377,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.314108192500469,0,0,0,0,0,0,4.56550495289562,0,1.21319294033318,0.285465333544967,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30497145982606,0,0,0.244736704506468,0.358177682162975,0,0,0,0,0,0,0,1.82315973706429,0,0,0,0,0,0.245772908753719,0,0,1.28030075632969,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,3.77503114712769,0,0,0,0,0.795664888465099,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.813689977576877,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,6.78424444040106,0,0,3.16249029709088,0.879524133963433,0.603851374266694,0,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,1.56221329209236,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,2.45472895518746,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@PRDM13 | |short_description=p1@PRDM13 | ||
}} | }} |
Latest revision as of 11:42, 19 September 2015
Short description: | p1@PRDM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRDM13_5end |
Coexpression cluster: | NA |
Association with transcript: | -254bp_to_AY130010_5end |
EntrezGene: | PRDM13 |
HGNC: | 13998 |
UniProt: | Q7Z5E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.82e-07 | 1 |
immature NK T cell | 2.82e-07 | 1 |
effector T cell | 2.82e-07 | 1 |
mature NK T cell | 2.82e-07 | 1 |
immature NK T cell stage IV | 2.82e-07 | 1 |
immature NK T cell stage I | 2.82e-07 | 1 |
immature NK T cell stage II | 2.82e-07 | 1 |
immature NK T cell stage III | 2.82e-07 | 1 |
epithelial cell of lung | 3.43e-07 | 19 |
antibody secreting cell | 4.78e-07 | 1 |
plasma cell | 4.78e-07 | 1 |
plasmablast | 4.78e-07 | 1 |
lung fibroblast | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pancreas | 8.63e-09 | 10 |
respiratory tract epithelium | 3.43e-07 | 19 |
lung epithelium | 3.43e-07 | 19 |
respiratory system epithelium | 9.81e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.89e-11 | 235 |
disease of cellular proliferation | 1.72e-10 | 239 |
lung cancer | 3.54e-09 | 15 |
respiratory system cancer | 1.37e-08 | 16 |
organ system cancer | 2.36e-08 | 137 |
bronchus cancer | 8.31e-08 | 7 |
bronchogenic carcinoma | 8.31e-08 | 7 |
skin squamous cell carcinoma | 6.76e-07 | 1 |
keratoacanthoma | 6.76e-07 | 1 |