FFCP PHASE1:Hg19::chr18:3742467..3742480,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9229 | |EntrezGene=9229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2905 | |HGNC=2905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000485480_5end | |association_with_transcript=34bp_to_ENST00000485480_5end | ||
|cluster_id=chr18:3742467..3742480,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_19_at_DLGAP1_5end | |description=CAGE_peak_19_at_DLGAP1_5end | ||
|id=chr18:3742467..3742480,- | |id=chr18:3742467..3742480,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.53e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.79e-07;82 | |||
|ontology_enrichment_disease=DOID:171!3.67e-16!10;DOID:3095!5.57e-07!22;DOID:2994!5.57e-07!22 | |ontology_enrichment_disease=DOID:171!3.67e-16!10;DOID:3095!5.57e-07!22;DOID:2994!5.57e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;2.70e-36;10!DOID:3095;4.85e-17;22!DOID:2994;4.85e-17;22!DOID:169;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.40e-36,10;DOID:3095,4.60e-17,22;DOID:2994,4.60e-17,22;DOID:169,5.54e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;2.71e-40;4!UBERON:0000923;2.71e-40;4!UBERON:0010316;2.71e-40;4!UBERON:0005291;2.71e-40;4!UBERON:0002050;1.70e-32;5!UBERON:0005423;1.70e-32;5!UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5!UBERON:0001872;3.22e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0001950;1.53e-08;20!UBERON:0002619;6.98e-08;22!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0002021,3.22e-09,5;UBERON:0001872,3.49e-09,5;UBERON:0001950,1.59e-08,20;UBERON:0002346,6.20e-08,86;UBERON:0002619,7.23e-08,22;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25 | |||
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| ||
|short_description=p19@DLGAP1 | |short_description=p19@DLGAP1 | ||
}} | }} |
Latest revision as of 11:58, 19 September 2015
Short description: | p19@DLGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DLGAP1_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 34bp_to_ENST00000485480_5end |
EntrezGene: | DLGAP1 |
HGNC: | 2905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.53e-09 | 5 |
autonomic nervous system | 2.53e-09 | 5 |
occipital lobe | 3.22e-09 | 5 |
parietal lobe | 3.49e-09 | 5 |
neocortex | 1.59e-08 | 20 |
neurectoderm | 6.20e-08 | 86 |
regional part of cerebral cortex | 7.23e-08 | 22 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.40e-36 | 10 |
germ cell and embryonal cancer | 4.60e-17 | 22 |
germ cell cancer | 4.60e-17 | 22 |
neuroendocrine tumor | 5.54e-08 | 6 |