FFCP PHASE1:Hg19::chr12:57623992..57624003,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:57623992..57624003,+
|short_description=p9@SHMT2
|description=CAGE_peak_9_at_SHMT2_5end
|association_with_transcript=38bp_to_ENST00000557302_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6472 | |EntrezGene=6472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10852 | |HGNC=10852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000557302_5end | |||
|cluster_id=chr12:57623992..57624003,+ | |||
|coexpression_cluster_id=C2221 | |||
|description=CAGE_peak_9_at_SHMT2_5end | |||
|id=chr12:57623992..57624003,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.75e-18!679;CL:0000004!2.75e-18!679;CL:0000255!2.75e-18!679;CL:0000012!1.19e-17!682;CL:0000144!2.76e-12!625;CL:0000055!3.28e-11!180;CL:0002371!2.05e-10!591;CL:0000003!2.26e-10!722;CL:0000057!6.05e-10!75;CL:0000063!7.34e-10!578;CL:0002620!4.11e-07!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@SHMT2 | |||
}} | }} |
Latest revision as of 13:38, 19 September 2015
Short description: | p9@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHMT2_5end |
Coexpression cluster: | C2221_Mesenchymal_Fibroblast_Keratocytes_Keratinocyte_Osteoblast_mesenchymal_Hepatocyte |
Association with transcript: | 38bp_to_ENST00000557302_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data