FFCP PHASE1:Hg19::chrX:135618258..135618269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51442 | |EntrezGene=51442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20985 | |HGNC=20985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000440515_5end | |association_with_transcript=-17bp_to_ENST00000440515_5end | ||
|cluster_id=chrX:135618258..135618269,+ | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_6_at_VGLL1_5end | |description=CAGE_peak_6_at_VGLL1_5end | ||
|id=chrX:135618258..135618269,+ | |id=chrX:135618258..135618269,+ | ||
|ontology_enrichment_celltype=CL:0002541!8.55e-17!3;CL:0000039!4.53e-16!7;CL:0000586!4.53e-16!7;CL:0002563!2.09e-12!4;CL:0002149!1.04e-08!6;CL:0002255!1.04e-08!6;CL:0002253!4.69e-07!2;CL:0000223!9.79e-07!59 | |ontology_enrichment_celltype=CL:0002541!8.55e-17!3;CL:0000039!4.53e-16!7;CL:0000586!4.53e-16!7;CL:0002563!2.09e-12!4;CL:0002149!1.04e-08!6;CL:0002255!1.04e-08!6;CL:0002253!4.69e-07!2;CL:0000223!9.79e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.96e-43;7!CL:0000586;6.96e-43;7!CL:0002541;2.89e-12;3!CL:0000083;1.12e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.96e-43,7;CL:0000586,6.96e-43,7;CL:0002541,3.24e-12,3;CL:0000083,1.12e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.05e-34;1 | |||
|ontology_enrichment_disease=DOID:1799!1.61e-13!1;DOID:10165!1.61e-13!1;DOID:1798!1.61e-13!1;DOID:178!6.06e-13!1;DOID:326!6.06e-13!1;DOID:3978!6.06e-13!1;DOID:3394!6.06e-13!1;DOID:5844!6.06e-13!1;DOID:3001!1.04e-08!6;DOID:114!4.17e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.84e-34;1!DOID:10165;1.84e-34;1!DOID:1798;1.84e-34;1!DOID:3095;2.85e-14;22!DOID:2994;2.85e-14;22!DOID:1793;1.12e-09;4!DOID:170;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.84e-34,1;DOID:10165,1.84e-34,1;DOID:1798,1.84e-34,1;DOID:3095,2.85e-14,22;DOID:2994,2.85e-14,22;DOID:1793,1.12e-09,4;DOID:170,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!8.55e-17!3;UBERON:0000920!8.55e-17!3;UBERON:0003124!6.46e-16!7;UBERON:0001242!2.09e-12!4;UBERON:0001262!2.09e-12!4;UBERON:0004786!2.09e-12!4;UBERON:0004808!2.09e-12!4;UBERON:0001277!2.09e-12!4;UBERON:0003350!4.12e-10!5;UBERON:0005631!3.10e-08!14;UBERON:0000158!3.10e-08!14 | |ontology_enrichment_uberon=UBERON:0000476!8.55e-17!3;UBERON:0000920!8.55e-17!3;UBERON:0003124!6.46e-16!7;UBERON:0001242!2.09e-12!4;UBERON:0001262!2.09e-12!4;UBERON:0004786!2.09e-12!4;UBERON:0004808!2.09e-12!4;UBERON:0001277!2.09e-12!4;UBERON:0003350!4.12e-10!5;UBERON:0005631!3.10e-08!14;UBERON:0000158!3.10e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.89e-12;3!UBERON:0000920;2.89e-12;3!UBERON:0001987;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.04e-19,7;UBERON:0000920,3.24e-12,3;UBERON:0005631,2.19e-10,14;UBERON:0000158,2.19e-10,14;UBERON:0001987,1.44e-09,4;UBERON:0004340,1.44e-09,4 | |||
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|short_description=p6@VGLL1 | |short_description=p6@VGLL1 | ||
}} | }} |
Latest revision as of 14:49, 19 September 2015
Short description: | p6@VGLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VGLL1_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | -17bp_to_ENST00000440515_5end |
EntrezGene: | VGLL1 |
HGNC: | 20985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.96e-43 | 7 |
germ cell | 6.96e-43 | 7 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
epithelial cell of pancreas | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.04e-19 | 7 |
egg chorion | 3.24e-12 | 3 |
extraembryonic membrane | 2.19e-10 | 14 |
membranous layer | 2.19e-10 | 14 |
placenta | 1.44e-09 | 4 |
allantois | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.84e-34 | 1 |
endocrine pancreas cancer | 1.84e-34 | 1 |
pancreatic endocrine carcinoma | 1.84e-34 | 1 |
germ cell and embryonal cancer | 2.85e-14 | 22 |
germ cell cancer | 2.85e-14 | 22 |
pancreatic cancer | 1.12e-09 | 4 |
endocrine gland cancer | 7.17e-07 | 6 |