FFCP PHASE1:Hg19::chr15:89191020..89191067,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3669 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6130 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558236_5end | |||
|cluster_id=chr15:89191020..89191067,+ | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_13_at_ISG20_5end | |||
|id=chr15:89191020..89191067,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.87e-36!14;CL:0000945!1.54e-34!24;CL:0000826!1.54e-34!24;CL:0000838!2.68e-25!52;CL:0000542!9.55e-25!53;CL:0000051!9.55e-25!53;CL:0002087!2.27e-11!119;CL:0002031!1.72e-09!124;CL:0000738!4.69e-09!140 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.85e-82;13!CL:0000945;3.91e-58;24!CL:0000542;1.34e-24;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.77e-76,14;CL:0000945,3.77e-58,24;CL:0000826,3.77e-58,24;CL:0000838,7.16e-27,52;CL:0000542,2.30e-26,53;CL:0000051,2.30e-26,53;CL:0002087,5.66e-12,115;CL:0002031,1.81e-11,120;CL:0000738,4.23e-10,136;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,3.94e-08,168;CL:0000988,1.06e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.34e-24;53!UBERON:0001045;3.67e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.67e-23;1!UBERON:0001153;3.67e-23;1!UBERON:0009854;3.67e-23;1!UBERON:0009856;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.10e-23,1;UBERON:0001153,4.10e-23,1;UBERON:0001045,4.10e-23,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11990884584383,0.142169232487422,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82297027883492,4.44754626931777,2.98711155796555,2.40237592221607,2.29900975981793,2.64417949113945,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p13@ISG20 | |||
}} |
Latest revision as of 15:42, 19 September 2015
Short description: | p13@ISG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ISG20_5end |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | 0bp_to_ENST00000558236_5end |
EntrezGene: | ISG20 |
HGNC: | 6130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.77e-76 | 14 |
lymphocyte of B lineage | 3.77e-58 | 24 |
pro-B cell | 3.77e-58 | 24 |
lymphoid lineage restricted progenitor cell | 7.16e-27 | 52 |
lymphocyte | 2.30e-26 | 53 |
common lymphoid progenitor | 2.30e-26 | 53 |
nongranular leukocyte | 5.66e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.81e-11 | 120 |
leukocyte | 4.23e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 3.94e-08 | 168 |
hematopoietic cell | 1.06e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.10e-23 | 1 |
caecum | 4.10e-23 | 1 |
midgut | 4.10e-23 | 1 |