FFCP PHASE1:Hg19::chr18:47087304..47087313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9388 | |EntrezGene=9388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6623 | |HGNC=6623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=235bp_to_AK125344_5end | |association_with_transcript=235bp_to_AK125344_5end | ||
|cluster_id=chr18:47087304..47087313,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_8_at_LIPG_5end | |description=CAGE_peak_8_at_LIPG_5end | ||
|id=chr18:47087304..47087313,+ | |id=chr18:47087304..47087313,+ | ||
|ontology_enrichment_celltype=CL:0002543!1.87e-10!6;CL:0002618!1.03e-09!3;CL:0002139!9.10e-07!24 | |ontology_enrichment_celltype=CL:0002543!1.87e-10!6;CL:0002618!1.03e-09!3;CL:0002139!9.10e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.21e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.57e-32;5 | |||
|ontology_enrichment_disease=DOID:3371!6.19e-08!1;DOID:4549!6.19e-08!1;DOID:5861!6.19e-08!1;DOID:6496!6.19e-08!1 | |ontology_enrichment_disease=DOID:3371!6.19e-08!1;DOID:4549!6.19e-08!1;DOID:5861!6.19e-08!1;DOID:6496!6.19e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!5.62e-15!2;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0001638!3.98e-07!9;UBERON:0003920!3.98e-07!9;UBERON:0004582!3.98e-07!9;UBERON:0003914!4.23e-07!118 | |ontology_enrichment_uberon=UBERON:0000341!5.62e-15!2;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0001638!3.98e-07!9;UBERON:0003920!3.98e-07!9;UBERON:0004582!3.98e-07!9;UBERON:0003914!4.23e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.57e-32;5!UBERON:0000341;4.21e-21;2!UBERON:0002368;9.38e-11;33!UBERON:0000974;6.13e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.44e-32,5;UBERON:0004117,1.44e-32,5;UBERON:0007689,1.44e-32,5;UBERON:0007123,1.44e-32,5;UBERON:0003091,1.44e-32,5;UBERON:0000341,4.66e-21,2;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0002368,5.49e-11,35;UBERON:0008814,7.42e-10,18;UBERON:0000949,1.01e-08,45;UBERON:0003929,2.17e-07,54;UBERON:0002530,8.00e-07,59 | |||
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|short_description=p8@LIPG | |short_description=p8@LIPG | ||
}} | }} |
Latest revision as of 17:40, 19 September 2015
Short description: | p8@LIPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LIPG_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 235bp_to_AK125344_5end |
EntrezGene: | LIPG |
HGNC: | 6623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.44e-32 | 5 |
pharyngeal pouch | 1.44e-32 | 5 |
thyroid diverticulum | 1.44e-32 | 5 |
pharyngeal pouch 2 | 1.44e-32 | 5 |
thyroid primordium | 1.44e-32 | 5 |
throat | 4.66e-21 | 2 |
entire pharyngeal arch endoderm | 1.88e-15 | 11 |
early pharyngeal endoderm | 1.88e-15 | 11 |
endocrine gland | 5.49e-11 | 35 |
pharyngeal arch system | 7.42e-10 | 18 |
endocrine system | 1.01e-08 | 45 |
gut epithelium | 2.17e-07 | 54 |
gland | 8.00e-07 | 59 |