FFCP PHASE1:Hg19::chr18:47340200..47340235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10449 | |EntrezGene=10449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |HGNC=83 | ||
|TSSclassifier=strong | |||
|UniProt=B3KNP8,P42765 | |UniProt=B3KNP8,P42765 | ||
|association_with_transcript=15bp_to_NM_006111,uc002ldw.3_5end | |association_with_transcript=15bp_to_NM_006111,uc002ldw.3_5end | ||
|cluster_id=chr18:47340200..47340235,- | |||
|description=CAGE_peak_6_at_ACAA2_5end | |description=CAGE_peak_6_at_ACAA2_5end | ||
|id=chr18:47340200..47340235,- | |id=chr18:47340200..47340235,- | ||
|ontology_enrichment_celltype=CL:0000055!4.33e-10!180;CL:0000136!1.20e-07!15 | |ontology_enrichment_celltype=CL:0000055!4.33e-10!180;CL:0000136!1.20e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.55e-07;13 | |ontology_enrichment_celltype_v019=CL:0000136;5.55e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.46e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.09e-16!659;UBERON:0000467!1.12e-12!625;UBERON:0000480!2.37e-12!626;UBERON:0000926!8.22e-10!448;UBERON:0004120!8.22e-10!448;UBERON:0006603!8.22e-10!448;UBERON:0000922!9.02e-10!612;UBERON:0002050!1.17e-08!605;UBERON:0005423!1.17e-08!605;UBERON:0002204!1.31e-08!167;UBERON:0000923!1.47e-08!604;UBERON:0005291!1.47e-08!604;UBERON:0006598!1.47e-08!604;UBERON:0002532!1.47e-08!604;UBERON:0002049!8.10e-08!79;UBERON:0007798!8.10e-08!79;UBERON:0004872!1.51e-07!84;UBERON:0001009!2.40e-07!113;UBERON:0001981!4.87e-07!60;UBERON:0007500!4.87e-07!60;UBERON:0004537!4.87e-07!60;UBERON:0006965!4.87e-07!60;UBERON:0000055!6.41e-07!69 | |ontology_enrichment_uberon=UBERON:0000468!1.09e-16!659;UBERON:0000467!1.12e-12!625;UBERON:0000480!2.37e-12!626;UBERON:0000926!8.22e-10!448;UBERON:0004120!8.22e-10!448;UBERON:0006603!8.22e-10!448;UBERON:0000922!9.02e-10!612;UBERON:0002050!1.17e-08!605;UBERON:0005423!1.17e-08!605;UBERON:0002204!1.31e-08!167;UBERON:0000923!1.47e-08!604;UBERON:0005291!1.47e-08!604;UBERON:0006598!1.47e-08!604;UBERON:0002532!1.47e-08!604;UBERON:0002049!8.10e-08!79;UBERON:0007798!8.10e-08!79;UBERON:0004872!1.51e-07!84;UBERON:0001009!2.40e-07!113;UBERON:0001981!4.87e-07!60;UBERON:0007500!4.87e-07!60;UBERON:0004537!4.87e-07!60;UBERON:0006965!4.87e-07!60;UBERON:0000055!6.41e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.11e-09,315;UBERON:0004120,1.11e-09,315;UBERON:0006603,1.11e-09,315;UBERON:0002204,1.95e-09,167;UBERON:0002049,7.98e-08,78;UBERON:0007798,7.98e-08,78;UBERON:0000922,1.36e-07,592;UBERON:0004872,3.26e-07,83;UBERON:0005423,3.32e-07,581;UBERON:0001009,3.47e-07,112;UBERON:0000055,5.19e-07,68;UBERON:0007500,7.08e-07,59;UBERON:0001981,7.08e-07,59;UBERON:0004537,7.08e-07,59;UBERON:0006965,7.08e-07,59 | |||
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| ||
|short_description=p6@ACAA2 | |short_description=p6@ACAA2 | ||
}} | }} |
Latest revision as of 17:54, 19 September 2015
Short description: | p6@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ACAA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_NM_006111, uc002ldw.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | B3KNP8P42765 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.46e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.11e-09 | 315 |
mesoderm-derived structure | 1.11e-09 | 315 |
presumptive mesoderm | 1.11e-09 | 315 |
musculoskeletal system | 1.95e-09 | 167 |
vasculature | 7.98e-08 | 78 |
vascular system | 7.98e-08 | 78 |
embryo | 1.36e-07 | 592 |
splanchnic layer of lateral plate mesoderm | 3.26e-07 | 83 |
developing anatomical structure | 3.32e-07 | 581 |
circulatory system | 3.47e-07 | 112 |
vessel | 5.19e-07 | 68 |
epithelial tube open at both ends | 7.08e-07 | 59 |
blood vessel | 7.08e-07 | 59 |
blood vasculature | 7.08e-07 | 59 |
vascular cord | 7.08e-07 | 59 |