FFCP PHASE1:Hg19::chr19:53547983..53547999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100271846 | |EntrezGene=100271846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39051 | |HGNC=39051 | ||
|TSSclassifier=strong | |||
|UniProt=B6SEH9 | |UniProt=B6SEH9 | ||
|association_with_transcript=0bp_to_NM_001191055_5end | |association_with_transcript=0bp_to_NM_001191055_5end | ||
|cluster_id=chr19:53547983..53547999,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_1_at_ERVV-2_5end | |description=CAGE_peak_1_at_ERVV-2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!7.86e-20!7;CL:0000586!7.86e-20!7;CL:0000066!3.99e-10!254;CL:0000239!2.74e-09!3;CL:1000615!2.74e-09!3;CL:0002306!2.74e-09!3;CL:1000507!5.20e-08!12;CL:1000494!5.20e-08!12;CL:1000415!4.93e-07!2;CL:1000497!7.28e-07!18;CL:0002518!7.28e-07!18;CL:0002536!9.86e-07!2 | |ontology_enrichment_celltype=CL:0000039!7.86e-20!7;CL:0000586!7.86e-20!7;CL:0000066!3.99e-10!254;CL:0000239!2.74e-09!3;CL:1000615!2.74e-09!3;CL:0002306!2.74e-09!3;CL:1000507!5.20e-08!12;CL:1000494!5.20e-08!12;CL:1000415!4.93e-07!2;CL:1000497!7.28e-07!18;CL:0002518!7.28e-07!18;CL:0002536!9.86e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.10e-11;7!CL:0000586;1.10e-11;7!CL:1000507;5.38e-08;10!CL:1000494;5.38e-08;10!CL:1000497;6.21e-08;17!CL:0002518;6.21e-08;17!CL:0002681;9.71e-07;12!CL:0002584;9.71e-07;12 | |ontology_enrichment_celltype_v019=CL:0000039;1.10e-11;7!CL:0000586;1.10e-11;7!CL:1000507;5.38e-08;10!CL:1000494;5.38e-08;10!CL:1000497;6.21e-08;17!CL:0002518;6.21e-08;17!CL:0002681;9.71e-07;12!CL:0002584;9.71e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.10e-11,7;CL:0000586,1.10e-11,7;CL:1000507,5.51e-08,10;CL:1000494,5.51e-08,10;CL:1000497,6.56e-08,17;CL:0002518,6.56e-08,17;CL:0002681,9.91e-07,12;CL:0002584,9.91e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.74e-10;1 | |ontology_enrichment_development_v019=UBERON:0003124;3.74e-10;1 | ||
|ontology_enrichment_disease=DOID:0050687!1.05e-12!143;DOID:162!1.92e-12!235;DOID:305!4.52e-12!106;DOID:14566!5.88e-12!239;DOID:3095!4.96e-11!22;DOID:2994!4.96e-11!22 | |ontology_enrichment_disease=DOID:0050687!1.05e-12!143;DOID:162!1.92e-12!235;DOID:305!4.52e-12!106;DOID:14566!5.88e-12!239;DOID:3095!4.96e-11!22;DOID:2994!4.96e-11!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;6.88e-10;1!DOID:10165;6.88e-10;1!DOID:1798;6.88e-10;1!DOID:4960;2.08e-09;1!DOID:0070004;2.08e-09;1!DOID:6193;2.08e-09;1 | |ontology_enrichment_disease_v019=DOID:1799;6.88e-10;1!DOID:10165;6.88e-10;1!DOID:1798;6.88e-10;1!DOID:4960;2.08e-09;1!DOID:0070004;2.08e-09;1!DOID:6193;2.08e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,6.88e-10,1;DOID:10165,6.88e-10,1;DOID:1798,6.88e-10,1;DOID:4960,1.91e-09,1;DOID:0070004,1.91e-09,1;DOID:6193,2.67e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0006853!2.74e-09!3;UBERON:0007685!2.74e-09!3;UBERON:0004134!2.74e-09!3;UBERON:0009773!5.20e-08!12;UBERON:0001231!5.20e-08!12;UBERON:0004810!5.20e-08!12;UBERON:0002113!8.64e-07!27;UBERON:0003918!8.64e-07!27;UBERON:0005095!8.64e-07!27;UBERON:0007687!8.64e-07!27 | |ontology_enrichment_uberon=UBERON:0006853!2.74e-09!3;UBERON:0007685!2.74e-09!3;UBERON:0004134!2.74e-09!3;UBERON:0009773!5.20e-08!12;UBERON:0001231!5.20e-08!12;UBERON:0004810!5.20e-08!12;UBERON:0002113!8.64e-07!27;UBERON:0003918!8.64e-07!27;UBERON:0005095!8.64e-07!27;UBERON:0007687!8.64e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001851;4.40e-09;15!UBERON:0004211;5.38e-08;10!UBERON:0009773;5.38e-08;10!UBERON:0001231;5.38e-08;10!UBERON:0004810;5.38e-08;10!UBERON:0001225;9.71e-07;12!UBERON:0008987;9.71e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001851;4.40e-09;15!UBERON:0004211;5.38e-08;10!UBERON:0009773;5.38e-08;10!UBERON:0001231;5.38e-08;10!UBERON:0004810;5.38e-08;10!UBERON:0001225;9.71e-07;12!UBERON:0008987;9.71e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,4.50e-09,15;UBERON:0004810,5.51e-08,10;UBERON:0001225,9.91e-07,12;UBERON:0008987,9.91e-07,12 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.96597234917155,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.200506470303285,0,0,0,0,1.35359883872224,4.38987421495164,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,4.15538004464362,0.223874754722178,0,0,0,0,0,41.3194456707366,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.3061483573184,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20020494198781,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,36.8902247020896,24.2345639906385,23.4678323351537,1.27600463892768,0.274792780205587,0,0,0,0,0,0,0,0.189753732724185,0,4.43095935508857,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,5.12297182853627,0,0.520679215005393,0.195984794828755,0,0,1.0319161948297,0,0,0,0,0,0,0,0.19871461170299,0,0.977756913674015,4.24841747333129,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.12693372507022,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54993481694734,0,0,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,12.0477079461454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,143.609137293312,0,0,0,0,0,0,0,0,22.1415009017893,0,1.07963795609311,0,0,3.79232668158544,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.98150233615243,0,0,0,0,0,0.233939463462106,0,0,0,0,1.96251696636676,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0.633492505057185,0.305966489225945,0.534434810531121,0.18378979906969,0.50141507858475,0,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ERVV-2 | |short_description=p1@ERVV-2 | ||
}} | }} |
Latest revision as of 18:29, 19 September 2015
Short description: | p1@ERVV-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ERVV-2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_NM_001191055_5end |
EntrezGene: | ERVV-2 |
HGNC: | 39051 |
UniProt: | B6SEH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.10e-11 | 7 |
germ cell | 1.10e-11 | 7 |
kidney tubule cell | 5.51e-08 | 10 |
nephron tubule epithelial cell | 5.51e-08 | 10 |
kidney cell | 6.56e-08 | 17 |
kidney epithelial cell | 6.56e-08 | 17 |
kidney cortical cell | 9.91e-07 | 12 |
renal cortical epithelial cell | 9.91e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cortex | 4.50e-09 | 15 |
nephron tubule epithelium | 5.51e-08 | 10 |
cortex of kidney | 9.91e-07 | 12 |
renal parenchyma | 9.91e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.88e-10 | 1 |
endocrine pancreas cancer | 6.88e-10 | 1 |
pancreatic endocrine carcinoma | 6.88e-10 | 1 |
bone marrow cancer | 1.91e-09 | 1 |
myeloma | 1.91e-09 | 1 |
epithelioid sarcoma | 2.67e-09 | 1 |