FFCP PHASE1:Hg19::chr22:31365243..31365303,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:31365243..31365303,+ to FFCP PHASE1:Hg19::chr22:31365243..31365303,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55000 | |EntrezGene=55000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26066 | |HGNC=26066 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-330bp_to_NR_002323,uc003ajf.1,uc003ajg.2,uc003ajh.2,uc003aji.2_5end | |||
|cluster_id=chr22:31365243..31365303,+ | |||
|description=CAGE_peak_1_at_TUG1_5end | |||
|id=chr22:31365243..31365303,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.41e-14!42;CL:0000860!9.97e-14!45;CL:0000766!3.78e-11!76;CL:0000839!1.36e-10!70;CL:0000557!5.17e-10!71;CL:0002194!6.10e-09!63;CL:0000576!6.10e-09!63;CL:0000040!6.10e-09!63;CL:0000559!6.10e-09!63;CL:0002009!1.21e-08!65;CL:0002031!1.73e-07!124;CL:0000738!2.14e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.92e-16;33!CL:0002057;4.92e-16;33!CL:0000576;2.97e-09;48!CL:0000473;4.70e-09;39!CL:0000234;4.70e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-14,42;CL:0002057,5.41e-14,42;CL:0000766,6.79e-11,72;CL:0000839,2.39e-10,66;CL:0000557,9.30e-10,67;CL:0000473,1.34e-09,48;CL:0000234,1.34e-09,48;CL:0002194,1.08e-08,59;CL:0000576,1.08e-08,59;CL:0000040,1.08e-08,59;CL:0000559,1.08e-08,59;CL:0002009,2.18e-08,61;CL:0002031,3.38e-07,120;CL:0000738,4.17e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-10;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.56e-10!102;UBERON:0003061!4.56e-10!102;UBERON:0002193!4.57e-09!112;UBERON:0002371!6.81e-07!80;UBERON:0001474!7.39e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.02e-10,98;UBERON:0003061,9.02e-10,98;UBERON:0002193,9.12e-09,108 | |||
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| ||
|short_description=p1@TUG1 | |||
}} | }} |
Latest revision as of 19:10, 19 September 2015
Short description: | p1@TUG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -330bp_to_NR_002323, uc003ajf.1, uc003ajg.2, uc003ajh.2, uc003aji.2_5end |
EntrezGene: | TUG1 |
HGNC: | 26066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.41e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-14 | 42 |
myeloid leukocyte | 6.79e-11 | 72 |
myeloid lineage restricted progenitor cell | 2.39e-10 | 66 |
granulocyte monocyte progenitor cell | 9.30e-10 | 67 |
defensive cell | 1.34e-09 | 48 |
phagocyte | 1.34e-09 | 48 |
monopoietic cell | 1.08e-08 | 59 |
monocyte | 1.08e-08 | 59 |
monoblast | 1.08e-08 | 59 |
promonocyte | 1.08e-08 | 59 |
macrophage dendritic cell progenitor | 2.18e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 3.38e-07 | 120 |
leukocyte | 4.17e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.02e-10 | 98 |
blood island | 9.02e-10 | 98 |
hemolymphoid system | 9.12e-09 | 108 |