FFCP PHASE1:Hg19::chr6:7579922..7579931,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:7579922..7579931,+
|short_description=p17@DSP
|description=CAGE_peak_17_at_DSP_5end
|association_with_transcript=139bp_to_J05211_5end
|EntrezGene=1832
|H...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=139bp_to_J05211_5end | |||
|cluster_id=chr6:7579922..7579931,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_17_at_DSP_5end | |||
|id=chr6:7579922..7579931,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.13e-17!254;CL:0000223!5.08e-12!59;CL:0002076!1.00e-11!43;CL:0002251!2.26e-10!21;CL:0000039!3.92e-07!7;CL:0000586!3.92e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.69e-16;3!CL:0002336;2.60e-12;1!CL:0002261;2.60e-12;1!CL:0002170;2.60e-12;1!CL:0000622;4.55e-10;5!CL:0002251;2.82e-09;20!CL:0000154;1.55e-08;6!CL:0000240;3.02e-08;6!CL:0000311;3.02e-08;6!CL:0000079;3.02e-08;6!CL:0000237;3.02e-08;6!CL:0000039;3.45e-07;7!CL:0000586;3.45e-07;7!CL:0002535;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.69e-16,3;CL:0002336,3.08e-12,1;CL:0002261,3.08e-12,1;CL:0002170,3.08e-12,1;CL:0000622,4.55e-10,5;CL:0002251,2.92e-09,20;CL:0000154,1.55e-08,6;CL:0000240,3.50e-08,6;CL:0000311,3.50e-08,6;CL:0000079,3.50e-08,6;CL:0000237,3.50e-08,6;CL:0000036,3.50e-08,6;CL:0000357,3.50e-08,6;CL:0000114,3.50e-08,6;CL:0000039,3.56e-07,7;CL:0000586,3.56e-07,7;CL:0002535,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.60e-12;1!CL:0000357;3.02e-08;6!CL:0000114;3.02e-08;6!UBERON:0008814;4.82e-07;2!UBERON:0010056;4.82e-07;2 | |||
|ontology_enrichment_disease=DOID:305!8.56e-19!106;DOID:0050687!4.60e-15!143;DOID:162!4.00e-08!235;DOID:14566!1.31e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.60e-12;1!DOID:3149;2.60e-12;1!DOID:3451;8.76e-07;2!DOID:4159;8.76e-07;2!DOID:0060122;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.31e-12,1;DOID:3149,4.31e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-09!169;UBERON:0000925!1.11e-09!169;UBERON:0006595!1.11e-09!169;UBERON:0001007!1.31e-07!155;UBERON:0001555!1.31e-07!155;UBERON:0007026!1.31e-07!155;UBERON:0001004!2.15e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.49e-16;3!UBERON:0001033;6.49e-16;3!UBERON:0000165;4.14e-14;28!UBERON:0007029;2.60e-12;1!UBERON:0000014;6.37e-12;4!UBERON:0001044;1.55e-08;6!UBERON:0003293;1.55e-08;6!UBERON:0003294;1.55e-08;6!UBERON:0010047;1.55e-08;6!UBERON:0003408;1.55e-08;6!UBERON:0000167;1.55e-08;6!UBERON:0001041;8.51e-08;14!UBERON:0006955;8.76e-07;2!UBERON:0004801;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.26e-16,3;UBERON:0001033,6.26e-16,3;UBERON:0010056,6.26e-16,3;UBERON:0000165,1.34e-13,29;UBERON:0000930,1.34e-13,29;UBERON:0000166,8.35e-13,22;UBERON:0007029,1.40e-12,1;UBERON:0000014,6.03e-12,4;UBERON:0000161,5.93e-11,36;UBERON:0003102,6.34e-10,99;UBERON:0001044,1.55e-08,6;UBERON:0003293,1.55e-08,6;UBERON:0003294,1.55e-08,6;UBERON:0010047,1.55e-08,6;UBERON:0000167,1.55e-08,6;UBERON:0001444,6.90e-08,49;UBERON:0000033,7.57e-07,56;UBERON:0006955,7.61e-07,2;UBERON:0004801,7.61e-07,2 | |||
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| ||
|short_description=p17@DSP | |||
}} | }} |
Latest revision as of 19:29, 19 September 2015
Short description: | p17@DSP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_DSP_5end |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | 139bp_to_J05211_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.69e-16 | 3 |
buccal mucosa cell | 3.08e-12 | 1 |
endothelial cell of viscerocranial mucosa | 3.08e-12 | 1 |
keratinized cell of the oral mucosa | 3.08e-12 | 1 |
acinar cell | 4.55e-10 | 5 |
epithelial cell of alimentary canal | 2.92e-09 | 20 |
protein secreting cell | 1.55e-08 | 6 |
stratified squamous epithelial cell | 3.50e-08 | 6 |
keratin accumulating cell | 3.50e-08 | 6 |
stratified epithelial cell | 3.50e-08 | 6 |
keratinizing barrier epithelial cell | 3.50e-08 | 6 |
epithelial fate stem cell | 3.50e-08 | 6 |
stratified epithelial stem cell | 3.50e-08 | 6 |
surface ectodermal cell | 3.50e-08 | 6 |
germ line cell | 3.56e-07 | 7 |
germ cell | 3.56e-07 | 7 |
epithelial cell of cervix | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 6.26e-16 | 3 |
gustatory system | 6.26e-16 | 3 |
future tongue | 6.26e-16 | 3 |
mouth | 1.34e-13 | 29 |
stomodeum | 1.34e-13 | 29 |
oral opening | 8.35e-13 | 22 |
surface | 1.40e-12 | 1 |
zone of skin | 6.03e-12 | 4 |
orifice | 5.93e-11 | 36 |
surface structure | 6.34e-10 | 99 |
saliva-secreting gland | 1.55e-08 | 6 |
gland of oral region | 1.55e-08 | 6 |
gland of foregut | 1.55e-08 | 6 |
oral gland | 1.55e-08 | 6 |
oral cavity | 1.55e-08 | 6 |
subdivision of head | 6.90e-08 | 49 |
head | 7.57e-07 | 56 |
uterine epithelium | 7.61e-07 | 2 |
cervix epithelium | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.31e-12 | 1 |
keratoacanthoma | 4.31e-12 | 1 |