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FFCP PHASE1:Hg19::chr6:75898243..75898255,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:75898243..75898255,-
|DHSsupport=supported 
|short_description=p9@COL12A1
|DPIdataset=robust
|description=CAGE_peak_9_at_COL12A1_5end
|association_with_transcript=0bp_to_uc003phu.1_5end
|EntrezGene=1303
|EntrezGene=1303
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=2188
|HGNC=2188
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc003phu.1_5end
|cluster_id=chr6:75898243..75898255,-
|coexpression_cluster_id=C259
|description=CAGE_peak_9_at_COL12A1_5end
|id=chr6:75898243..75898255,-
|ontology_enrichment_celltype=CL:0000057!3.75e-13!75;CL:0000055!2.49e-10!180;CL:0002620!2.65e-10!23;CL:0000499!3.51e-09!27;CL:0000723!1.11e-07!436;CL:0000048!2.11e-07!430;CL:0000153!3.90e-07!9;CL:0000447!3.90e-07!9;CL:0002320!3.95e-07!365;CL:0000034!4.23e-07!444;CL:0000136!4.54e-07!15;CL:0002334!6.23e-07!12
|ontology_enrichment_celltype_v019=CL:0002579;2.28e-18;3!CL:0002617;4.69e-13;2!CL:0002334;2.59e-12;12!CL:0000153;2.62e-10;9!CL:0000447;2.62e-10;9!CL:0000499;3.21e-09;28!CL:0000138;3.76e-09;6!CL:0002580;4.06e-09;3!CL:0000135;5.47e-09;3!CL:0000388;5.47e-09;3!CL:0002615;7.05e-09;3!CL:0002620;2.78e-08;23!CL:0000136;1.63e-07;13
|ontology_enrichment_celltype_v019_2=CL:0002579,1.39e-18,3;CL:0000057,5.37e-14,76;CL:0000136,1.24e-13,15;CL:0002617,4.17e-13,2;CL:0002334,1.95e-12,12;CL:0000153,2.62e-10,9;CL:0000447,2.62e-10,9;CL:0000058,3.51e-09,6;CL:0000138,3.51e-09,6;CL:0002580,3.54e-09,3;CL:0000499,3.55e-09,28;CL:0000135,5.47e-09,3;CL:0000388,5.47e-09,3;CL:0002615,8.41e-09,3;CL:0002620,2.51e-08,23;CL:0000134,5.93e-08,354;CL:0002320,1.10e-07,361;CL:0000219,9.52e-07,386
|ontology_enrichment_development_v019=UBERON:0000358;3.39e-07;1
|ontology_enrichment_disease=DOID:17!1.27e-07!5;DOID:450!1.27e-07!5;DOID:66!1.27e-07!5;DOID:423!1.27e-07!5;DOID:0080000!1.27e-07!5;DOID:11722!1.27e-07!5
|ontology_enrichment_disease_v019=DOID:4235;6.68e-07;1
|ontology_enrichment_disease_v019_2=DOID:4235,8.67e-07,1
|ontology_enrichment_uberon=UBERON:0002199!7.17e-11!45;UBERON:0002416!7.17e-11!45;UBERON:0003688!7.37e-10!6;UBERON:0002358!7.37e-10!6;UBERON:0003684!7.37e-10!6;UBERON:0001178!7.37e-10!6;UBERON:0002097!1.08e-09!40;UBERON:0004457!6.22e-09!12;UBERON:0000042!6.22e-09!12;UBERON:0003102!1.76e-08!95;UBERON:0002384!8.38e-07!375
|ontology_enrichment_uberon_v019=UBERON:0003688;1.55e-24;6!UBERON:0002358;1.55e-24;6!UBERON:0003684;1.55e-24;6!UBERON:0001178;1.55e-24;6!UBERON:0004457;6.09e-23;9!UBERON:0000042;6.09e-23;9!UBERON:0000310;6.89e-10;10!UBERON:0001443;5.39e-09;11!UBERON:0007846;5.47e-09;3!UBERON:0000043;5.47e-09;3!UBERON:0007845;5.47e-09;3
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.28e-24,6;UBERON:0002358,1.28e-24,6;UBERON:0003684,1.28e-24,6;UBERON:0001178,1.28e-24,6;UBERON:0004457,4.29e-17,12;UBERON:0000042,4.29e-17,12;UBERON:0000310,6.08e-10,10;UBERON:0001443,4.81e-09,11;UBERON:0007846,5.47e-09,3;UBERON:0000043,5.47e-09,3;UBERON:0007845,5.47e-09,3;UBERON:0002384,2.53e-07,371;UBERON:0004923,4.73e-07,66
|phase1_expression=2.90685406832891,6.42301571672949,2.25527046553554,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.50401373190767,3.0417768981773,0,1.45990461090791,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,1.48360157567134,0,0,0.168336113954066,0.250237039743928,0,0,1.22595118319608,0,0.113432183160021,0.538168907066586,2.34913127700424,1.69545520927649,0.600182192168805,0.412210116953756,1.54584324027377,1.30281799432113,0.843881661206331,0.194874010322397,0.757301322732344,1.47279837827679,0.161646056818812,1.06502877754984,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.904902010304444,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.03985430765404,3.21172179834891,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0.992431231275107,3.6830873589135,8.70046292742528,1.79394808957981,3.07024349440022,4.82561763430822,0,0.154209693802656,0.177561725313127,0,0,0,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04135843001079,0,0,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0.50313580350515,0.889811221596536,0,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0,1.5652351854352,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,2.06037423109676,1.6837474438296,0,0,0.428883182749851,0.260994291965212,0,0.231522474323834,0,0.71635536432595,0.617602894321944,0.219284049578707,0,0,0.168942440653073,0,0,0.607719912354764,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,4.593682160298,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,3.34795516350076,0,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0
|phase1_expression=2.90685406832891,6.42301571672949,2.25527046553554,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.50401373190767,3.0417768981773,0,1.45990461090791,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,1.48360157567134,0,0,0.168336113954066,0.250237039743928,0,0,1.22595118319608,0,0.113432183160021,0.538168907066586,2.34913127700424,1.69545520927649,0.600182192168805,0.412210116953756,1.54584324027377,1.30281799432113,0.843881661206331,0.194874010322397,0.757301322732344,1.47279837827679,0.161646056818812,1.06502877754984,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.904902010304444,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.03985430765404,3.21172179834891,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0.992431231275107,3.6830873589135,8.70046292742528,1.79394808957981,3.07024349440022,4.82561763430822,0,0.154209693802656,0.177561725313127,0,0,0,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04135843001079,0,0,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0.50313580350515,0.889811221596536,0,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0,1.5652351854352,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,2.06037423109676,1.6837474438296,0,0,0.428883182749851,0.260994291965212,0,0.231522474323834,0,0.71635536432595,0.617602894321944,0.219284049578707,0,0,0.168942440653073,0,0,0.607719912354764,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,4.593682160298,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,3.34795516350076,0,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0
|short_description=p9@COL12A1
}}
}}

Latest revision as of 20:26, 19 September 2015

Short description:p9@COL12A1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_9_at_COL12A1_5end
Coexpression cluster:C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing
Association with transcript: 0bp_to_uc003phu.1_5end
EntrezGene:COL12A1
HGNC: 2188
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data