FFCP PHASE1:Hg19::chr3:120401033..120401040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3081 | |EntrezGene=3081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4892 | |HGNC=4892 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_,49bp_to_ENST00000466528,ENST00000488183_5end | |association_with_transcript=-49bp_to_,49bp_to_ENST00000466528,ENST00000488183_5end | ||
|cluster_id=chr3:120401033..120401040,- | |||
|description=CAGE_peak_3_at_HGD_5end | |description=CAGE_peak_3_at_HGD_5end | ||
|id=chr3:120401033..120401040,- | |id=chr3:120401033..120401040,- | ||
|ontology_enrichment_celltype=CL:0000159!5.26e-10!2;CL:0000181!2.95e-09!12;CL:0000417!2.95e-09!12;CL:0000668!2.95e-09!12;CL:0000414!2.95e-09!12;CL:0000412!2.95e-09!12;CL:0000182!2.95e-09!12 | |ontology_enrichment_celltype=CL:0000159!5.26e-10!2;CL:0000181!2.95e-09!12;CL:0000417!2.95e-09!12;CL:0000668!2.95e-09!12;CL:0000414!2.95e-09!12;CL:0000412!2.95e-09!12;CL:0000182!2.95e-09!12 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.55e-18;5!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10!UBERON:0003104;2.63e-07;31 | |ontology_enrichment_development_v019=UBERON:0007123;1.55e-18;5!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10!UBERON:0003104;2.63e-07;31 | ||
|ontology_enrichment_disease=DOID:305!1.07e-10!106;DOID:4468!1.46e-10!2;DOID:299!2.60e-10!25;DOID:0050687!8.68e-09!143 | |ontology_enrichment_disease=DOID:305!1.07e-10!106;DOID:4468!1.46e-10!2;DOID:299!2.60e-10!25;DOID:0050687!8.68e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.37e-44;2 | |ontology_enrichment_disease_v019=DOID:4468;1.37e-44;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,1.53e-44,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002046;1.55e-18;5!UBERON:0000341;2.07e-12;2!UBERON:0002368;3.28e-10;33 | |ontology_enrichment_uberon_v019=UBERON:0002046;1.55e-18;5!UBERON:0000341;2.07e-12;2!UBERON:0002368;3.28e-10;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.35e-18,5;UBERON:0004117,1.35e-18,5;UBERON:0007689,1.35e-18,5;UBERON:0007123,1.35e-18,5;UBERON:0003091,1.35e-18,5;UBERON:0000341,2.32e-12,2;UBERON:0002368,1.66e-10,35;UBERON:0009722,5.41e-09,11;UBERON:0007690,5.41e-09,11;UBERON:0000949,3.00e-08,45;UBERON:0003929,6.31e-07,54;UBERON:0005172,6.31e-07,54;UBERON:0005173,6.31e-07,54 | |||
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| ||
|short_description=p3@HGD | |short_description=p3@HGD | ||
}} | }} |
Latest revision as of 22:16, 19 September 2015
Short description: | p3@HGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HGD_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_, 49bp_to_ENST00000466528, ENST00000488183_5end |
EntrezGene: | HGD |
HGNC: | 4892 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.35e-18 | 5 |
pharyngeal pouch | 1.35e-18 | 5 |
thyroid diverticulum | 1.35e-18 | 5 |
pharyngeal pouch 2 | 1.35e-18 | 5 |
thyroid primordium | 1.35e-18 | 5 |
throat | 2.32e-12 | 2 |
endocrine gland | 1.66e-10 | 35 |
entire pharyngeal arch endoderm | 5.41e-09 | 11 |
early pharyngeal endoderm | 5.41e-09 | 11 |
endocrine system | 3.00e-08 | 45 |
gut epithelium | 6.31e-07 | 54 |
abdomen element | 6.31e-07 | 54 |
abdominal segment element | 6.31e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.53e-44 | 2 |