FFCP PHASE1:Hg19::chr1:95582484..95582492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148534 | |EntrezGene=148534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26477 | |HGNC=26477 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MV1 | |UniProt=Q96MV1 | ||
|association_with_transcript=-401bp_to_ENST00000370203,NM_152487,uc001drb.2_5end | |association_with_transcript=-401bp_to_ENST00000370203,NM_152487,uc001drb.2_5end | ||
|cluster_id=chr1:95582484..95582492,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_10_at_TMEM56_5end | |description=CAGE_peak_10_at_TMEM56_5end | ||
|id=chr1:95582484..95582492,+ | |id=chr1:95582484..95582492,+ | ||
|ontology_enrichment_celltype=CL:0000764!2.45e-11!2;CL:0000765!2.45e-11!2;CL:0000050!2.45e-11!2;CL:0000038!2.45e-11!2;CL:0000558!2.45e-11!2;CL:0000547!2.45e-11!2;CL:0000549!2.45e-11!2;CL:0000550!2.45e-11!2;CL:0000552!2.45e-11!2 | |ontology_enrichment_celltype=CL:0000764!2.45e-11!2;CL:0000765!2.45e-11!2;CL:0000050!2.45e-11!2;CL:0000038!2.45e-11!2;CL:0000558!2.45e-11!2;CL:0000547!2.45e-11!2;CL:0000549!2.45e-11!2;CL:0000550!2.45e-11!2;CL:0000552!2.45e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.29e-195;2!CL:0000558;3.29e-195;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.29e-195,2;CL:0000765,3.29e-195,2;CL:0000050,3.29e-195,2;CL:0000038,3.29e-195,2;CL:0000558,3.29e-195,2;CL:0000547,3.29e-195,2;CL:0000549,3.29e-195,2;CL:0000550,3.29e-195,2;CL:0000552,3.29e-195,2;CL:0000839,3.65e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-15!115;UBERON:0001950!3.70e-13!20;UBERON:0000200!6.44e-13!6;UBERON:0002619!6.63e-12!22;UBERON:0000956!2.19e-10!25;UBERON:0000203!2.19e-10!25;UBERON:0001869!5.29e-10!32;UBERON:0001893!2.42e-09!34;UBERON:0002780!2.74e-09!41;UBERON:0001890!2.74e-09!41;UBERON:0006240!2.74e-09!41;UBERON:0001049!3.80e-09!57;UBERON:0005068!3.80e-09!57;UBERON:0006241!3.80e-09!57;UBERON:0007135!3.80e-09!57;UBERON:0003080!4.97e-09!42;UBERON:0002616!9.19e-09!59;UBERON:0000955!2.42e-08!69;UBERON:0006238!2.42e-08!69;UBERON:0002791!1.19e-07!33;UBERON:0002771!1.22e-07!3;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0005743!2.04e-07!86;UBERON:0002020!2.13e-07!34;UBERON:0003528!2.13e-07!34;UBERON:0002346!3.95e-07!90;UBERON:0003056!4.80e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!6.31e-15!115;UBERON:0001950!3.70e-13!20;UBERON:0000200!6.44e-13!6;UBERON:0002619!6.63e-12!22;UBERON:0000956!2.19e-10!25;UBERON:0000203!2.19e-10!25;UBERON:0001869!5.29e-10!32;UBERON:0001893!2.42e-09!34;UBERON:0002780!2.74e-09!41;UBERON:0001890!2.74e-09!41;UBERON:0006240!2.74e-09!41;UBERON:0001049!3.80e-09!57;UBERON:0005068!3.80e-09!57;UBERON:0006241!3.80e-09!57;UBERON:0007135!3.80e-09!57;UBERON:0003080!4.97e-09!42;UBERON:0002616!9.19e-09!59;UBERON:0000955!2.42e-08!69;UBERON:0006238!2.42e-08!69;UBERON:0002791!1.19e-07!33;UBERON:0002771!1.22e-07!3;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0005743!2.04e-07!86;UBERON:0002020!2.13e-07!34;UBERON:0003528!2.13e-07!34;UBERON:0002346!3.95e-07!90;UBERON:0003056!4.80e-07!61 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p10@TMEM56 | |short_description=p10@TMEM56 | ||
}} | }} |
Latest revision as of 23:49, 19 September 2015
Short description: | p10@TMEM56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMEM56_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -401bp_to_ENST00000370203, NM_152487, uc001drb.2_5end |
EntrezGene: | TMEM56 |
HGNC: | 26477 |
UniProt: | Q96MV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.29e-195 | 2 |
erythroblast | 3.29e-195 | 2 |
megakaryocyte-erythroid progenitor cell | 3.29e-195 | 2 |
erythroid progenitor cell | 3.29e-195 | 2 |
reticulocyte | 3.29e-195 | 2 |
proerythroblast | 3.29e-195 | 2 |
basophilic erythroblast | 3.29e-195 | 2 |
polychromatophilic erythroblast | 3.29e-195 | 2 |
orthochromatic erythroblast | 3.29e-195 | 2 |
myeloid lineage restricted progenitor cell | 3.65e-07 | 66 |