FFCP PHASE1:Hg19::chr5:126113018..126113036,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENST00000463908_5end | |association_with_transcript=-34bp_to_ENST00000463908_5end | ||
|cluster_id=chr5:126113018..126113036,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_5_at_LMNB1_5end | |description=CAGE_peak_5_at_LMNB1_5end | ||
|id=chr5:126113018..126113036,+ | |id=chr5:126113018..126113036,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.13e-08!25 | |ontology_enrichment_celltype=CL:0002319!6.13e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;7.57e-12;6!CL:0000404;7.57e-12;6!CL:0000123;2.96e-09;2!CL:0000242;2.96e-09;2!CL:0000182;1.03e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-12,6;CL:0000031,6.36e-12,6;CL:0000404,6.36e-12,6;CL:0000242,1.39e-09,2;CL:0000047,5.93e-09,8;CL:0000182,1.11e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000031;7.57e-12;6 | |||
|ontology_enrichment_disease=DOID:162!7.42e-24!235;DOID:14566!3.77e-23!239;DOID:0050687!4.34e-17!143;DOID:305!3.54e-16!106;DOID:0050686!1.06e-09!137;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51;DOID:1240!3.39e-07!39 | |ontology_enrichment_disease=DOID:162!7.42e-24!235;DOID:14566!3.77e-23!239;DOID:0050687!4.34e-17!143;DOID:305!3.54e-16!106;DOID:0050686!1.06e-09!137;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51;DOID:1240!3.39e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.24e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.93e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.10e-07!9;UBERON:0001557!1.43e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!1.10e-07!9;UBERON:0001557!1.43e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.61e-07;9!UBERON:0001557;1.61e-07;9!UBERON:0002107;1.73e-07;19!UBERON:0006925;1.73e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.74e-07,19;UBERON:0006925,1.74e-07,19;UBERON:0008836,1.74e-07,19;UBERON:0001737,2.51e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.85870796139317,0.136874425072884,0.502170558379211,0.534893840235659,0.821005894499457,0.472264687882075,0,0.383829398097213,0,0,0,0,0.387336002901508,0,0,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0.575384784644301,0.768482119587302,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.797854630486527,2.13112375266347,0,0,0,0.75374599577023,1.0429658368404,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.786839080455332,0.786021525498329,0.411202997999018,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0.766440987203842,0.34362744548263,0.759059076058509,0.637130828648193,0,0,0.150575119077773,0,0,0,0,0.403213486449465,1.60464117470104,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.661743720148475,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.450445921933289,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0.453728732640084,0.358779271377724,0,0,0.600182192168805,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0,0,0.355009592516614,0,0.339121184620975,0,0,0,0.853815942907168,0.530119073285941,0.929551542956147,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0.828147600278907,1.18009283054671,1.20505514941741,0.661763836394364,1.30727666455444,0.949082476444386,0.808987848960987,0.98110732562673,1.15424147083917,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.264145302039678,0,0.432359860250884,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.2937654491571,0.256686072559497,0.76228387266739,0,4.63973287666617,0.167516265334349,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0.343143423810856,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.464841513839837,0.362578348774867,0,0,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0.438519753291869,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0.54941678891006,0.41254749960294,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.511359764496605,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0.371606350251437,0.144269212976445,0.924843963529383,1.11598390910176,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0.456469358066384,1.09675927041116,0,0.169291777801603,1.1241165257259,1.41259795033733,0.425846237690326,0.687010689511529,0.614481528616916,0.447352215784832,0.667396566847634,0.19538809540204,2.50565556505718,0,0,0,0,0.37428108081644,0,0.970884173996107,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0.659215496907038,0.422250816255987,0,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,2.3948309234694,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.709163045303809,0.344743373241465,0,1.38899995946634,0,0.120596438625408,0,0.331737779793674,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.46112780877612,1.25660702173681,0.325942115766024,0,0.0915975934018623,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0,0.503464760927528,0.37950746544837,0.476809736941136,0.632994193584081,0.816164040795739,0.141353071433941,0,0,0.176915129006678,0,24.9077748091722,25.7012993008726,27.0452849219129,0,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0,0.300646838828985,1.34794648816421,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0.783532859223623,0,0.171986032471617,1.35458863804719,0.803982487948041,0.821154570532092,0,0.353024506766001,0,0.411125773940253,0.397429223405979,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0.458146384663663,0.686379991447858,0.14405479798815,0.124252535565433,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0.288950589901519,0,0,1.27746588066972,0,12.8814803596864,0,0,0,0,0,0,0,0,0,2.44227865152393,1.31865373409866,2.76354529802158,0.590564889088493,0.931406652723629,0,0,1.60753148465019,0.687697182986169,1.24632101408756,0.2249738915515,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0.170388021785422,0.453248366080503,0,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0.37494122388632,0,0,0,1.87333962322753,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.680117776536817,0.231522474323834,0.244736704506468,0,0.617602894321944,0.438568099157414,0.176689145945881,0,0.168942440653073,1.28120759293973,0.345430341731199,0,0,0,0.132864840313363,0.327130788511688,0,0,0.633936370075881,2.19986135440423,0.426766918776564,0,1.13503190713367,0.184105950251841,0,0,0,0.107824811396682,0.471797825567689,0,0,0.637724760305049,0.495743057036009,0.558644917973244,0.318004350653419,0.0788617450012534,0.80057074828547,0,0.3062454773532,0,0,0,0,0,0,0.322951291263702,0,0.196295437002051,0.235939446695481,0.550285795565037,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0.785720083444267,0.327543835020193,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0.342976018874837,0.0679697329768317,0.0657727735628491,0.118193840883968,0.444925607568277,0,0,0,0,0,0,0,0.316027223465453,4.88213986546126,0,0,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0,0.955538938977433,0,2.35560560676583,1.82876887473404,0,0,0,0,1.87151570769685,0,0.356760272332706,0.11294608203896,0,0.905777061400041,0.231522474323834,0.655678681511872,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.599646935549574,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.546327859818478,1.0135880080915,0.509944148709909,0,0.275684698604535,0.250707539292375,0.227336094654718,0.535928260312357,0,0,0,0,0.645889098360061,0.248298857183432,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0.976839223331694,0.320182037633146,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.85870796139317,0.136874425072884,0.502170558379211,0.534893840235659,0.821005894499457,0.472264687882075,0,0.383829398097213,0,0,0,0,0.387336002901508,0,0,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0.575384784644301,0.768482119587302,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.797854630486527,2.13112375266347,0,0,0,0.75374599577023,1.0429658368404,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.786839080455332,0.786021525498329,0.411202997999018,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0.766440987203842,0.34362744548263,0.759059076058509,0.637130828648193,0,0,0.150575119077773,0,0,0,0,0.403213486449465,1.60464117470104,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.661743720148475,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.450445921933289,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0.453728732640084,0.358779271377724,0,0,0.600182192168805,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0,0,0.355009592516614,0,0.339121184620975,0,0,0,0.853815942907168,0.530119073285941,0.929551542956147,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0.828147600278907,1.18009283054671,1.20505514941741,0.661763836394364,1.30727666455444,0.949082476444386,0.808987848960987,0.98110732562673,1.15424147083917,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.264145302039678,0,0.432359860250884,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.2937654491571,0.256686072559497,0.76228387266739,0,4.63973287666617,0.167516265334349,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0.343143423810856,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.464841513839837,0.362578348774867,0,0,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0.438519753291869,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0.54941678891006,0.41254749960294,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.511359764496605,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0.371606350251437,0.144269212976445,0.924843963529383,1.11598390910176,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0.456469358066384,1.09675927041116,0,0.169291777801603,1.1241165257259,1.41259795033733,0.425846237690326,0.687010689511529,0.614481528616916,0.447352215784832,0.667396566847634,0.19538809540204,2.50565556505718,0,0,0,0,0.37428108081644,0,0.970884173996107,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0.659215496907038,0.422250816255987,0,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,2.3948309234694,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.709163045303809,0.344743373241465,0,1.38899995946634,0,0.120596438625408,0,0.331737779793674,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.46112780877612,1.25660702173681,0.325942115766024,0,0.0915975934018623,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0,0.503464760927528,0.37950746544837,0.476809736941136,0.632994193584081,0.816164040795739,0.141353071433941,0,0,0.176915129006678,0,24.9077748091722,25.7012993008726,27.0452849219129,0,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0,0.300646838828985,1.34794648816421,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0.783532859223623,0,0.171986032471617,1.35458863804719,0.803982487948041,0.821154570532092,0,0.353024506766001,0,0.411125773940253,0.397429223405979,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0.458146384663663,0.686379991447858,0.14405479798815,0.124252535565433,0.235694034616795,0.271808412147228,0.104602846312333,0.203996435272644,0.288950589901519,0,0,1.27746588066972,0,12.8814803596864,0,0,0,0,0,0,0,0,0,2.44227865152393,1.31865373409866,2.76354529802158,0.590564889088493,0.931406652723629,0,0,1.60753148465019,0.687697182986169,1.24632101408756,0.2249738915515,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0.170388021785422,0.453248366080503,0,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0.37494122388632,0,0,0,1.87333962322753,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.680117776536817,0.231522474323834,0.244736704506468,0,0.617602894321944,0.438568099157414,0.176689145945881,0,0.168942440653073,1.28120759293973,0.345430341731199,0,0,0,0.132864840313363,0.327130788511688,0,0,0.633936370075881,2.19986135440423,0.426766918776564,0,1.13503190713367,0.184105950251841,0,0,0,0.107824811396682,0.471797825567689,0,0,0.637724760305049,0.495743057036009,0.558644917973244,0.318004350653419,0.0788617450012534,0.80057074828547,0,0.3062454773532,0,0,0,0,0,0,0.322951291263702,0,0.196295437002051,0.235939446695481,0.550285795565037,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0.785720083444267,0.327543835020193,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0.342976018874837,0.0679697329768317,0.0657727735628491,0.118193840883968,0.444925607568277,0,0,0,0,0,0,0,0.316027223465453,4.88213986546126,0,0,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0,0.955538938977433,0,2.35560560676583,1.82876887473404,0,0,0,0,1.87151570769685,0,0.356760272332706,0.11294608203896,0,0.905777061400041,0.231522474323834,0.655678681511872,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.599646935549574,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.546327859818478,1.0135880080915,0.509944148709909,0,0.275684698604535,0.250707539292375,0.227336094654718,0.535928260312357,0,0,0,0,0.645889098360061,0.248298857183432,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0.976839223331694,0.320182037633146,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p5@LMNB1 | |short_description=p5@LMNB1 | ||
}} | }} |
Latest revision as of 01:38, 20 September 2015
Short description: | p5@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LMNB1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -34bp_to_ENST00000463908_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.36e-12 | 6 |
neuroblast | 6.36e-12 | 6 |
electrically signaling cell | 6.36e-12 | 6 |
Merkel cell | 1.39e-09 | 2 |
neuronal stem cell | 5.93e-09 | 8 |
hepatocyte | 1.11e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.74e-07 | 19 |
digestive gland | 1.74e-07 | 19 |
liver bud | 1.74e-07 | 19 |
larynx | 2.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.93e-10 | 2 |