FFCP PHASE1:Hg19::chr11:72852320..72852346,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9873 | |EntrezGene=9873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29114 | |HGNC=29114 | ||
|TSSclassifier=strong | |||
|UniProt=C9JM66 | |UniProt=C9JM66 | ||
|association_with_transcript=42bp_to_ENST00000422375_5end | |association_with_transcript=42bp_to_ENST00000422375_5end | ||
|cluster_id=chr11:72852320..72852346,- | |||
|description=CAGE_peak_17_at_FCHSD2_5end | |description=CAGE_peak_17_at_FCHSD2_5end | ||
|id=chr11:72852320..72852346,- | |id=chr11:72852320..72852346,- | ||
|ontology_enrichment_celltype=CL:0000945!4.45e-20!24;CL:0000826!4.45e-20!24;CL:0000236!3.07e-15!14;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000838!4.54e-07!52 | |ontology_enrichment_celltype=CL:0000945!4.45e-20!24;CL:0000826!4.45e-20!24;CL:0000236!3.07e-15!14;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000838!4.54e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.63e-34;13!CL:0000945;9.53e-25;24!CL:0000222;3.07e-14;1!CL:0000542;1.16e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.06e-31,14;CL:0000945,8.91e-25,24;CL:0000826,8.91e-25,24;CL:0000838,3.75e-11,52;CL:0000542,6.25e-11,53;CL:0000051,6.25e-11,53 | |||
|ontology_enrichment_development_v019=UBERON:0006298;8.55e-14;1!CL:0000051;1.16e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.14e-21!115;UBERON:0001049!7.93e-07!57;UBERON:0005068!7.93e-07!57;UBERON:0006241!7.93e-07!57;UBERON:0007135!7.93e-07!57;UBERON:0003075!9.72e-07!86;UBERON:0007284!9.72e-07!86;UBERON:0002780!9.79e-07!41;UBERON:0001890!9.79e-07!41;UBERON:0006240!9.79e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.55e-14;1!UBERON:0001736;8.55e-14;1!UBERON:0002135;8.55e-14;1!UBERON:0001961;8.55e-14;1!UBERON:0001744;8.55e-14;1!UBERON:0001042;8.55e-14;1!UBERON:0001735;8.55e-14;1!UBERON:0001897;1.54e-07;2!UBERON:0006562;1.54e-07;2!UBERON:0001829;1.54e-07;2!UBERON:0002133;1.54e-07;2!UBERON:0010225;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.98e-14,1;UBERON:0001961,3.98e-14,1;UBERON:0001744,3.98e-14,1;UBERON:0001735,3.98e-14,1;UBERON:0002135,7.55e-14,1;UBERON:0001736,8.58e-14,1;UBERON:0006298,8.58e-14,1;UBERON:0001897,1.28e-07,2;UBERON:0010225,1.28e-07,2;UBERON:0002133,1.45e-07,2;UBERON:0001829,1.54e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0.305653622991805,0.328402357799783,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.154934401160603,1.13735385989937,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,0.426730222566507,0.800791974072025,1.14950487990897,1.32208974556972,1.90810750907073,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0,0,0,0.26591592103773,0.476981248610684,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,1.02341449813341,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0.557409525377156,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0.102268682502155,0.615424027305347,0,0,0,0,0.295930216910801,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0.729819156862664,0,0.242780379534093,0,0,0.30607276163049,0.758238955541855,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.176512253383001,0.90392296312213,0,0,0.50648636764703,0,0,0.640358984218058,0.599428828746391,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0.273810757783986,0,0.429765441419957,0.262887354279314,1.39641200636127,0.458320848023367,0.717873024576814,0,0,0,0.671834724867263,0.360299883542404,0,0.236349546921671,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.728994679896296,0,0.394028536495991,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0.414239055347196,0.496166021811951,0,0.487170393523584,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,1.14681839138014,0.221858103073705,0.620964029413834,0.138348634936231,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0.754703705257725,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,7.57109389371906,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0.512483037175893,0,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.646948868380091,0,0.436838552768056,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0.337687923091973,0,0,0.253663240775627,0.546974809018219,0.548257766857182,0,0,0,0.535701835878287,0.672567444437648,0,0,0.266107110487916,0.806637912890455,0.171488009437418,0.271878931907327,0.263091094251396,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.980593287015622,0,0,0,0.8453114551668,0,1.59772660565751,0.902410431630081,0.199882311849858,0,0,0,0,1.37618785021362,0,0.315543124386369,0.339957450954573,0,0,0,0,0.432626562123789,0,0.546327859818478,0,0,0,0.0918948995348449,0,0.378893491091197,0,1.65833887891756,0.20686599172379,0.639701945702943,0,0.322944549180031,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,1.81850543139386,0.215166616178029,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0.201273793591026,0.961705476909699 | |phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0.305653622991805,0.328402357799783,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.154934401160603,1.13735385989937,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,0.426730222566507,0.800791974072025,1.14950487990897,1.32208974556972,1.90810750907073,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0,0,0,0.26591592103773,0.476981248610684,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,1.02341449813341,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0.557409525377156,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0.102268682502155,0.615424027305347,0,0,0,0,0.295930216910801,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0.729819156862664,0,0.242780379534093,0,0,0.30607276163049,0.758238955541855,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.176512253383001,0.90392296312213,0,0,0.50648636764703,0,0,0.640358984218058,0.599428828746391,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0.273810757783986,0,0.429765441419957,0.262887354279314,1.39641200636127,0.458320848023367,0.717873024576814,0,0,0,0.671834724867263,0.360299883542404,0,0.236349546921671,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.728994679896296,0,0.394028536495991,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0.414239055347196,0.496166021811951,0,0.487170393523584,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,1.14681839138014,0.221858103073705,0.620964029413834,0.138348634936231,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0.754703705257725,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,7.57109389371906,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0.512483037175893,0,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.646948868380091,0,0.436838552768056,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0.337687923091973,0,0,0.253663240775627,0.546974809018219,0.548257766857182,0,0,0,0.535701835878287,0.672567444437648,0,0,0.266107110487916,0.806637912890455,0.171488009437418,0.271878931907327,0.263091094251396,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.980593287015622,0,0,0,0.8453114551668,0,1.59772660565751,0.902410431630081,0.199882311849858,0,0,0,0,1.37618785021362,0,0.315543124386369,0.339957450954573,0,0,0,0,0.432626562123789,0,0.546327859818478,0,0,0,0.0918948995348449,0,0.378893491091197,0,1.65833887891756,0.20686599172379,0.639701945702943,0,0.322944549180031,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,1.81850543139386,0.215166616178029,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p17@FCHSD2 | |short_description=p17@FCHSD2 | ||
}} | }} |
Latest revision as of 02:18, 20 September 2015
Short description: | p17@FCHSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_FCHSD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000422375_5end |
EntrezGene: | FCHSD2 |
HGNC: | 29114 |
UniProt: | C9JM66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.06e-31 | 14 |
lymphocyte of B lineage | 8.91e-25 | 24 |
pro-B cell | 8.91e-25 | 24 |
lymphoid lineage restricted progenitor cell | 3.75e-11 | 52 |
lymphocyte | 6.25e-11 | 53 |
common lymphoid progenitor | 6.25e-11 | 53 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.98e-14 | 1 |
mucosa-associated lymphoid tissue | 3.98e-14 | 1 |
lymphoid tissue | 3.98e-14 | 1 |
tonsillar ring | 3.98e-14 | 1 |
mitral valve | 7.55e-14 | 1 |
submandibular gland | 8.58e-14 | 1 |
submandibular gland primordium | 8.58e-14 | 1 |
dorsal plus ventral thalamus | 1.28e-07 | 2 |
thalamic complex | 1.28e-07 | 2 |
atrioventricular valve | 1.45e-07 | 2 |
major salivary gland | 1.54e-07 | 2 |