FFCP PHASE1:Hg19::chr17:39659331..39659336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-319bp_to_ENST00000464634_5end | |association_with_transcript=-319bp_to_ENST00000464634_5end | ||
|cluster_id=chr17:39659331..39659336,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_20_at_KRT13_5end | |description=CAGE_peak_20_at_KRT13_5end | ||
|id=chr17:39659331..39659336,- | |id=chr17:39659331..39659336,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.71e-66;1!UBERON:0008814;4.27e-34;2!UBERON:0010056;4.27e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!6.06e-29!2;UBERON:0001723!3.66e-20!3;UBERON:0001033!3.66e-20!3;UBERON:0010056!3.66e-20!3;UBERON:0002372!1.16e-15!1;UBERON:0001961!1.16e-15!1;UBERON:0001744!1.16e-15!1;UBERON:0001735!1.16e-15!1;UBERON:0006834!3.17e-15!1;UBERON:0001042!1.47e-13!10;UBERON:0009145!1.47e-13!10;UBERON:0006562!2.21e-12!11;UBERON:0005795!1.32e-10!22;UBERON:0000002!1.90e-10!6;UBERON:0001560!1.90e-10!6;UBERON:0003126!5.59e-09!7;UBERON:0001005!5.59e-09!7;UBERON:0000341!2.00e-08!2;UBERON:0000078!8.81e-08!18;UBERON:0000072!1.00e-07!46;UBERON:0001557!2.13e-07!19;UBERON:0000161!8.94e-07!35;UBERON:0000166!9.68e-07!21 | |ontology_enrichment_uberon=UBERON:0003127!6.06e-29!2;UBERON:0001723!3.66e-20!3;UBERON:0001033!3.66e-20!3;UBERON:0010056!3.66e-20!3;UBERON:0002372!1.16e-15!1;UBERON:0001961!1.16e-15!1;UBERON:0001744!1.16e-15!1;UBERON:0001735!1.16e-15!1;UBERON:0006834!3.17e-15!1;UBERON:0001042!1.47e-13!10;UBERON:0009145!1.47e-13!10;UBERON:0006562!2.21e-12!11;UBERON:0005795!1.32e-10!22;UBERON:0000002!1.90e-10!6;UBERON:0001560!1.90e-10!6;UBERON:0003126!5.59e-09!7;UBERON:0001005!5.59e-09!7;UBERON:0000341!2.00e-08!2;UBERON:0000078!8.81e-08!18;UBERON:0000072!1.00e-07!46;UBERON:0001557!2.13e-07!19;UBERON:0000161!8.94e-07!35;UBERON:0000166!9.68e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;2.93e-23;3!UBERON:0001723;2.93e-23;3!UBERON:0001033;2.93e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,2.62e-23,3;UBERON:0009143,2.62e-23,3;UBERON:0001723,3.27e-23,3;UBERON:0001033,3.27e-23,3;UBERON:0010056,3.27e-23,3;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11 | |||
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|short_description=p20@KRT13 | |short_description=p20@KRT13 | ||
}} | }} |
Latest revision as of 05:28, 20 September 2015
Short description: | p20@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -319bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
esophagus | 2.62e-23 | 3 |
esophageal region | 2.62e-23 | 3 |
tongue | 3.27e-23 | 3 |
gustatory system | 3.27e-23 | 3 |
future tongue | 3.27e-23 | 3 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |