FFCP PHASE1:Hg19::chr12:69979113..69979155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10576 | |EntrezGene=10576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1615 | |HGNC=1615 | ||
|TSSclassifier=strong | |||
|UniProt=P78371 | |UniProt=P78371 | ||
|association_with_transcript=0bp_to_ENST00000299300_5end | |association_with_transcript=0bp_to_ENST00000299300_5end | ||
|cluster_id=chr12:69979113..69979155,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_12_at_CCT2_5end | |description=CAGE_peak_12_at_CCT2_5end | ||
|id=chr12:69979113..69979155,+ | |id=chr12:69979113..69979155,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.60e-10;2!CL:0000558;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-10,2;CL:0000765,3.58e-10,2;CL:0000050,3.58e-10,2;CL:0000038,3.58e-10,2;CL:0000558,3.58e-10,2;CL:0000547,3.58e-10,2;CL:0000549,3.58e-10,2;CL:0000550,3.58e-10,2;CL:0000552,3.58e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!UBERON:0006215;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002702;2.60e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11!UBERON:0001870;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,1.89e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0003135,1.20e-07,11;UBERON:0001870,2.19e-07,3 | |||
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| ||
|short_description=p12@CCT2 | |short_description=p12@CCT2 | ||
}} | }} |
Latest revision as of 06:13, 20 September 2015
Short description: | p12@CCT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CCT2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000299300_5end |
EntrezGene: | CCT2 |
HGNC: | 1615 |
UniProt: | P78371 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.58e-10 | 2 |
erythroblast | 3.58e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.58e-10 | 2 |
erythroid progenitor cell | 3.58e-10 | 2 |
reticulocyte | 3.58e-10 | 2 |
proerythroblast | 3.58e-10 | 2 |
basophilic erythroblast | 3.58e-10 | 2 |
polychromatophilic erythroblast | 3.58e-10 | 2 |
orthochromatic erythroblast | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 1.89e-10 | 2 |
testis | 3.52e-10 | 8 |
male reproductive organ | 1.20e-07 | 11 |
frontal cortex | 2.19e-07 | 3 |