FFCP PHASE1:Hg19::chr9:116327762..116327784,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-190bp_to_uc011lxh.1_5end | |||
|cluster_id=chr9:116327762..116327784,+ | |||
|description=CAGE_peak_6_at_RGS3_5end | |||
|id=chr9:116327762..116327784,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.87e-12!180;CL:0000220!3.10e-10!246;CL:0002321!6.16e-10!248;CL:0002076!9.99e-09!43;CL:0000057!1.18e-08!75;CL:0000066!3.94e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.38e-09;42!CL:0002368;9.15e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.46e-11,42;CL:0000066,1.70e-10,253;CL:0002368,6.80e-09,13;CL:0002321,1.76e-08,250;CL:0000057,4.25e-08,76;CL:0000223,9.74e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.10e-11!95;UBERON:0000475!1.20e-09!365;UBERON:0000481!3.64e-08!347;UBERON:0004119!1.78e-07!169;UBERON:0000925!1.78e-07!169;UBERON:0006595!1.78e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.53e-11,99;UBERON:0005157,4.06e-08,47 | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.26858963686374,0,0.446961094427288,0.872338524100369,0,0.631719873426831,1.56711376919903,1.72013755551056,2.09340350391728,0.655324116390517,1.31883489114227,1.36142988256051,0.994192127183747,0,0,0,0.975865597581014,0.492484232307152,1.22400414746552,3.76145665773705,0.572471974262113,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,1.83884244895785,3.0120591877825,19.5969625388397,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.436194716338694,0,0.727752183563449,0,0,0.619412741790207,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,2.43806866313962,2.68280343881454,2.81297636055767,1.0843174571537,3.00802746381534,2.60723734129483,7.95285947051099,6.32625331393427,1.03988298880475,1.33037638477538,0.527008714158756,0.851363990735132,10.5645633604837,4.82019775619758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,3.05265836499774,4.96971951695318,4.93858995491861,2.1185468930115,6.02356903572509,3.90135220418193,2.24271040056923,2.1349799145941,7.89336154934912,0.622422070799533,1.61652806483626,0.326923806226917,1.21085942115945,4.03323147135999,14.0592859100278,0,0,0,1.76151747965647,0.809364721840658,0,0.408308342509787,0.859840221182376,3.40975077880026,13.0680314301026,4.69807165629258,0,1.43723628363248,0.841680569770331,0.625592599359821,0.554128230968366,1.75591048352335,2.45190236639216,1.95309476578576,1.13432183160021,2.33206526395521,2.56268866582281,1.27159140695737,0.600182192168805,1.33968288009971,6.44101350114073,3.16398655763703,4.05063197379039,5.26159827870473,2.77677151668526,3.31379635112278,1.77810662500693,1.42003837006646,1.0075209822764,1.18692414617341,4.25173876959253,1.90922284413584,4.30206893083506,0.121973706129595,0,0,0.829288440122964,0.252320850875628,0,1.56449532329816,5.78916844373597,4.14404764057442,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0,0.38474715694639,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0,1.20097467208968,2.41450627898976,17.9842805212191,1.70899253099772,2.40729957412177,5.86454949558584,3.11980435583874,0,0.115930404975077,4.3441216867254,0,0,0,0,0,0,0,0,0.93733833986777,1.6798212819886,1.84307626415102,9.31408636109622,9.59091997096074,6.13412286664338,0,0,0.207328115540772,0,0,0,0.381988425558278,0,1.71072446022705,0,0,0,1.12131084345361,0.43596006883328,0.66004457238855,1.80980402060889,0,0,2.12750493267896,3.12022310734098,0.771622122786426,1.41849132023278,1.0656887160644,0.857867961948885,1.08524321078289,0,0,0.355391948742546,1.58390374586686,3.91871190177462,6.97226766880235,6.29829844446959,0,0,0,8.14724508671381,9.18895486672911,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,3.74503511973591,0,2.48649308061621,0.736148950314839,5.00170521059677,2.44138521329762,1.87173775377726,8.02930449587228,4.25796520591624,1.7571212248907,3.31040709700491,2.27407504055985,2.0694614258501,3.32112799267718,2.21243002250044,0.260650843404249,4.11182430671755,1.37257369524342,0,0,0,1.21251028578504,6.65741758041988,4.5358543999452,2.72918588600655,4.60385919864187,1.12264037773229,1.79394808957981,1.53512174720011,1.12597744800525,0,0.154209693802656,0.887808626565635,0.410635780069046,0,0.116210378459959,0,8.22076528243468,13.0755004288973,4.82220682291348,4.37018803216121,2.09799063935079,2.70719767744447,0.308061348417659,0.784349769176855,2.92278449306521,1.47772280450026,0,0,1.29549549661284,1.54227252690289,2.16757150035082,3.51182841698397,0.764628819135115,4.15538004464362,0.895499018888713,0,0.522870902049801,0,0.328014645699706,5.53143270929315,0.412164046590889,0.457847324091717,0.577566499444116,2.29706215198469,5.20048196829217,1.6068392984416,3.77015801339276,0.154048617114644,0.307007349452259,0.137836572484531,1.39646318328756,0.290033387828457,0.255679882248303,3.20515328328254,12.5616535674343,10.3782636377157,4.46644493731044,14.4655626623436,8.36721988735114,6.61105928344344,2.0911118104818,0.924100740528266,0.532306030317022,0,0.55597265731176,4.72312126248571,1.48863347743867,0.949138274156178,0.38126038784765,0.255897791311334,5.13526785640705,0,0.78494864019923,0,0.54907405947211,0.353437207037059,0.202182481573316,3.17020642346017,0,0.48763373908959,0.487426979262569,1.05650146756755,2.04749867111979,4.3835683905651,0,0.551365343546124,0.66343897524122,3.5076070820301,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,1.69017361519345,0.286822704408103,1.57198465620994,1.426684205925,3.19284957663538,1.47775344708365,0.987884678879706,0,7.69856384538962,8.7562122580216,6.70302275535787,13.0669181833587,0.188287601553558,5.59656984472599,3.36942951335251,5.76459199597678,1.37834040124176,1.01489521846434,1.52927441428475,1.70894156152249,0.238231775457789,1.23408681925858,1.94541993357815,0,1.58625035258854,0,0,0.490080431962063,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,1.68426486367398,0.293016358543788,0,0.111443384277478,0,0.95497793895076,0.593929361665277,0.614321404198464,0,0,4.56365690593914,0,0,2.39097585901284,0,0,0.409074730008619,0.369254416383208,1.55519793830904,1.70749867179921,3.40140231883657,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,21.4276999990679,0,0.682760689712998,1.27126825146383,0.472775363535873,0,0.583209226766509,0,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0.438770794307945,2.94133851501273,8.22600091243759,0.692552326534174,0.569710279235006,0,0.538545866458633,0,0.957003479195758,0.183195186803725,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.539209063845416,0,2.10838001152805,0,4.50028623543806,0.728341138602278,2.36750641709634,0,0,1.13735843331278,0,0,0,0,0,0,0,0.277349346026277,0,5.6835590500339,0,1.39781334593624,1.54787429224455,0,0,0,0.678923115418936,0.176512253383001,0.225980740780532,1.50746117111426,0.397429223405979,0.126621591911757,0,0,3.41524791582964,4.19600180122473,4.32271251462318,0,0,0,0.49701014226173,5.1852687615695,1.49494626680975,1.98745407993433,4.79391622890712,0.866851769704557,0.600420288709789,0,0,3.43812353135966,0,0.279282401272254,2.52076466412852,0.717873024576814,0.199679000498991,0.858452096273142,1.56220020209311,0.403100834920358,0.720599767084807,0,0.157566364614447,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.419636705079985,0.316801009558219,0.35857467866569,7.10086230081948,0,0,0,0,2.5926644736038,0,0,0,0,1.92630555584214,0,0,0.646414781807753,0.26446520348538,0,0.704815022316672,2.0289608387862,1.41483874589699,0,0,0.197611631897944,0.243585196761792,10.2134601243229,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0.74988244777264,2.27473676312472,0.285465333544967,15.057012460683,0,0.144921028610825,0.298509605773748,4.44055288709727,1.10961172300523,1.13641803165053,1.25783950876288,0,3.43260102595385,0.604923695052956,0.466311601748341,0,0.159296767163702,1.79921244865442,0.465788870628778,0,1.86089200190596,4.17396049449387,1.6528336989694,3.04644169735036,0,0,5.69275952325189,0.464033759878494,1.59238355479446,0.400027764663154,4.12074846219351,4.71449284272287,2.52369796457302,2.50405779529494,3.21662387062389,23.2284919849038,3.40058888268409,0.694567422971502,2.93684045407761,0.895444205407437,1.23520578864389,10.7449184293566,0.706756583783524,6.5590773012111,3.37884881306145,0.512483037175893,0,0.607719912354764,0.138258436151731,0,0,0,14.4148333492422,0,6.55067582411744,0,0,0.861074898304078,0,0,15.8063843722972,10.5753134205605,0.255788742607303,0.754773679776773,5.50430796495637,0,0,0,0.619678821295011,0,0.636008701306837,0,0,7.05351887381368,12.249819094128,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,5.59441995455846,0,1.83428598521679,0.924205329202706,6.48349562294184,0.690359926060101,0.397832444232549,0.977734268540344,1.0085253435176,0.781514011233092,0.523813388962845,4.9131575253029,4.28782650029431,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,1.09651553371436,0,0,2.29972369751271,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0,0.342976018874837,0.271878931907327,0.0657727735628491,0,0,0.549451649953598,0,2.5224494698241,0.913158720509496,0,0,0.214429632529969,0,0,2.60787408453869,0.801711364730253,7.66699807403236,2.0486217251274,2.07377898544228,0,1.89331201168905,0.937347452350735,1.69354820076372,1.3746412112643,0.31020638566432,0.955538938977433,0.223710863595585,3.4352581765335,0.853425474875886,0.647428837187895,0,0,0,0,0,0,0.33883824611688,0,5.28369952483357,0.231522474323834,0.437119121007915,3.29222107453066,0.735444965261716,0.235676547101626,0.196308467114945,0,0.4226557275834,4.07825075250761,0.751871343838829,0.322289439867886,0,0.535661815816973,2.11736923029415,1.04313776695919,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0.743990036333503,1.84870251452567,0,0.378499274505237,0.218531143927391,0,0.101988829741982,1.06886962106224,0.18378979906969,0,2.04602485189246,1.60778478093707,0.829169439458779,0.103432995861895,0.213233981900981,0.476128862927481,0.0645889098360061,0.0620747142958579,2.13050538903166,1.2729431655633,0.404234377916439,0.870866991587845,0,0.471464371102113,0.502055437748735,0.665320713092027,3.58174381888288,8.75164236197267,0,6.55723975378084,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p6@RGS3 | |||
}} |
Latest revision as of 07:23, 20 September 2015
Short description: | p6@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -190bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.46e-11 | 42 |
epithelial cell | 1.70e-10 | 253 |
respiratory epithelial cell | 6.80e-09 | 13 |
embryonic cell | 1.76e-08 | 250 |
fibroblast | 4.25e-08 | 76 |
endodermal cell | 9.74e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.53e-11 | 99 |
epithelial fold | 4.06e-08 | 47 |