FFCP PHASE1:Hg19::chr22:38598057..38598071,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6780 | |||
|TSSclassifier=strong | |||
|UniProt=B0QY71 | |||
|association_with_transcript=54bp_to_ENST00000441709_5end | |||
|cluster_id=chr22:38598057..38598071,+ | |||
|coexpression_cluster_id=C4101 | |||
|description=CAGE_peak_3_at_MAFF_5end | |||
|id=chr22:38598057..38598071,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.17e-11!42;CL:0000860!9.59e-10!45;CL:0000766!8.97e-08!76;CL:0002371!5.12e-07!591;CL:0000359!9.80e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.75e-11;33!CL:0002057;3.75e-11;33!CL:0000473;2.56e-07;39!CL:0000234;2.56e-07;39!CL:0002139;8.79e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-09,42;CL:0002057,1.06e-09,42;CL:0000473,8.92e-08,48;CL:0000234,8.92e-08,48;CL:0000766,1.07e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.07e-12!69;UBERON:0003081!3.24e-12!216;UBERON:0001981!9.86e-12!60;UBERON:0007500!9.86e-12!60;UBERON:0004537!9.86e-12!60;UBERON:0006965!9.86e-12!60;UBERON:0000926!1.22e-11!448;UBERON:0004120!1.22e-11!448;UBERON:0006603!1.22e-11!448;UBERON:0004872!1.90e-10!84;UBERON:0001637!2.00e-10!42;UBERON:0003509!2.00e-10!42;UBERON:0004572!2.00e-10!42;UBERON:0002049!2.35e-10!79;UBERON:0007798!2.35e-10!79;UBERON:0002204!1.53e-09!167;UBERON:0004573!2.70e-08!33;UBERON:0004571!2.70e-08!33;UBERON:0003914!1.70e-07!118;UBERON:0000467!3.87e-07!625;UBERON:0004535!4.26e-07!110;UBERON:0000480!4.36e-07!626;UBERON:0001009!5.31e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.08e-09;42!UBERON:0003509;9.08e-09;42!UBERON:0004572;9.08e-09;42!UBERON:0004573;1.36e-08;33!UBERON:0004571;1.36e-08;33!UBERON:0007500;1.20e-07;56!UBERON:0001981;1.20e-07;56!UBERON:0004537;1.20e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.17e-13,68;UBERON:0007500,9.93e-13,59;UBERON:0001981,9.93e-13,59;UBERON:0004537,9.93e-13,59;UBERON:0006965,9.93e-13,59;UBERON:0001637,2.07e-11,42;UBERON:0003509,2.07e-11,42;UBERON:0004572,2.07e-11,42;UBERON:0003081,2.19e-11,203;UBERON:0002049,7.23e-11,78;UBERON:0007798,7.23e-11,78;UBERON:0000926,1.05e-10,315;UBERON:0004120,1.05e-10,315;UBERON:0006603,1.05e-10,315;UBERON:0004872,1.85e-10,83;UBERON:0004573,4.25e-09,33;UBERON:0004571,4.25e-09,33;UBERON:0002204,9.83e-09,167;UBERON:0004535,1.74e-07,109;UBERON:0001009,2.42e-07,112;UBERON:0003914,3.48e-07,117 | |||
|phase1_expression=1.81678379270557,2.35510576280081,1.9733616573436,0,0.446961094427288,1.74467704820074,0,3.79031924056099,0.522371256399677,2.21160542851358,5.58240934377942,1.09220686065086,0.263766978228454,1.11389717664042,0.994192127183747,2.6893005858071,3.61616716814386,5.11217063271161,3.41552959153355,0.61560529038394,1.22400414746552,0.626909442956176,1.43117993565528,0.684372125364421,1.12988375635323,0.152826811495903,0,0,34.2226920858546,8.82807615623589,5.26374819274658,1.83884244895785,1.50602959389125,1.84877005083394,0,0,3.52320527201817,16.6198622559563,19.0517225096635,13.8886957258145,0.223915474239924,0.647787332037959,0.257575567634187,0.726991193897824,0.377875943688809,0.970336244751265,6.50801303335917,9.86802931252382,15.1756121738601,46.8938599485105,34.8378560879577,46.5869992880513,14.1345729102014,15.4916324060118,14.8969135253776,2.82363509313907,6.27684145133045,4.94391665779186,13.4676912643197,20.2185287057939,18.5407766481722,10.5552416059749,15.5581652944873,15.344091019177,10.7377418292576,18.7237124148076,32.3867569477699,33.4160724791469,36.5038042894141,52.9940781080485,11.502590550034,24.3063239751793,17.7218936966895,0.633765858935825,0.850417199860174,0.838634582033504,0.673971786878971,0.750884464207532,0.803627933485401,0.285012743741249,0.99458338599545,0,0,0,0,1.70692089026603,0,0,0,0,1.1384259382189,0,1.52909291250092,3.96513985737078,12.8916969485753,0,0.196709770113833,2.75107533924415,2.05601498999509,0.668745981562712,0,0,0,0,0.589211814949674,0.443067789167242,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0,1.04535523804977,0.226618685395132,0.766440987203842,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,6.24980903996671,10.4301676355568,4.19990771260117,2.43806866313962,0,0.895037932904712,1.44575660953827,1.50401373190767,5.35932120155048,0.795285947051099,4.86634870302636,1.32348744029695,1.99556457716308,0.790513071238134,0.982343066232845,0.364295288292542,1.11235332835329,0.324547393654683,0.174129737299267,0.531831842075461,1.19245312152671,1.71598473234038,0.371457501329565,5.16782259153433,0,6.59566953054429,3.95715559346807,5.03399323451887,2.47606237746061,3.13492449805216,2.32575083252396,1.42306505074684,3.3472061276467,2.81980521976403,6.0821768457481,8.54217201418593,2.57364156242108,4.0507097394088,2.23249320710199,2.46982309888787,2.47745257063309,3.06633274931766,3.79706263827252,4.21364011039937,18.4492584410489,77.5560528296651,1.74437620857014,0.993943903390637,2.02608818663328,1.45650098894541,1.43418310374407,1.41867352879343,3.92474320099615,5.33744978648525,0.98667019366864,0.311211035399766,1.61652806483626,0.817309515567294,0,0.576175924479999,5.38939293217732,0.624320153660641,2.85235910772225,3.13842229158782,1.87895197830024,1.78060238804945,0.280901613404497,0.204154171254893,2.08818339430006,1.75653827998801,2.37600571456411,4.94533858557114,0,10.0606539854273,1.34668891163253,2.37725187756732,1.93944880838928,3.5118209670467,4.29082914118628,5.70904623845068,3.74326204428069,3.04962380671065,1.70845911054854,3.39091041855299,0,1.54578793857658,2.06112432036503,0.744467425326359,1.0126579934476,1.26668106709558,1.7670364197088,2.30124746605748,0.80823028409406,1.77504796258307,1.10827308050404,2.7129694769678,2.12586938479627,1.63647672354501,0.573609190778008,0.365921118388786,0.265059536642971,0.464775771478074,0.518305275076852,0,0,1.56449532329816,0.643240938192885,0,5.10804720835177,1.44375896333917,1.0647612003586,0.842923450390509,1.20505514941741,0.55146986366197,1.08939722046203,0.949082476444386,1.07865046528132,2.15843611637881,1.15424147083917,0,8.41450642820675,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.491953754172454,1.20097467208968,1.53650399572076,2.24803506515239,2.41269533787914,1.94435734832912,3.9096996637239,0,0,0.463721619900307,0.587043471179108,5.34155856715973,2.31492756288305,4.18559134916116,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,2.85569617938061,1.41775097242386,2.14940454486836,4.94077695473735,3.4504441124869,3.4486426652716,0,5.59785911960085,16.2855547361166,1.51490920111656,1.20645999155121,3.4378958300245,3.51652341630141,1.71072446022705,1.7480673759565,1.50171528921959,3.14409075893636,0.784917590417525,0,1.54010400223995,2.58543431515556,0,6.762422020448,1.86156681609409,1.04007436911366,0.771622122786426,1.41849132023278,1.8649552531127,0.714889968290738,0,0.823240336780769,2.60588947434988,0.355391948742546,2.37585561880029,2.1100756394171,3.48613383440118,1.99945982364114,2.43247561282381,0.502257091432126,2.10833939483032,1.19812427745791,1.14861935834114,1.42636905040718,2.02693829334611,1.64381058040307,0.537182889719687,0.336255431980582,13.3980916937311,10.7813787429759,15.1444782810103,1.01637849688985,1.30139853857622,2.31986643833309,0.670065061337395,0.637938751653163,14.9801404789436,5.9832291840805,7.87389475528467,0.858840442033979,1.00034104211935,2.17012018959788,2.07970861530807,2.85486382075459,0.788512075169673,3.74852527976682,0.601892199455438,2.27407504055985,3.10419213877515,1.99267679560631,4.79359838208428,1.91143951829782,0.783204629850962,0.686286847621712,2.89475236572042,9.92285323765637,4.37582986994122,3.63753085735511,1.66435439510497,0.604780586659361,2.23297027036899,0.920771839728375,1.68396056659844,2.30650468660262,0,1.44768529029247,0,4.78050050788232,3.72879623157567,4.59912073677331,6.75030757938707,3.83494248917865,0.846016147141356,1.40354529212299,1.47329582297434,1.49258782613989,4.73437036817464,2.75361271414791,3.60959690325929,2.84956747286335,3.92174884588428,1.46139224653261,1.26661954671451,0,1.70093705276516,1.94324324491925,9.25363516141736,0.270946437543853,1.50506932156456,1.78413391131527,3.3243040357149,0.447749509444357,0.219259876645935,0.784306353074702,1.02580050046556,0.656029291399411,0.976135183992909,2.47298427954533,0.0915694648183434,0,1.72279661398852,1.30012049207304,3.21367859688319,1.93341436584244,1.84858340537573,0.767518373630648,2.20538515975249,0.966782203814463,1.59518363305651,1.10794615640931,0.445160178233687,1.4875642382488,1.72971060628596,1.78657797492418,1.31505115112215,3.253918845081,1.25924938732256,4.1822236209636,4.62050370264133,5.85536633348724,7.82939692867565,3.33583594387056,4.29374660225974,0.744316738719335,0.316379424718726,0.571890581771475,1.27948895655667,1.71175595213568,3.81843897511124,7.06453776179307,0.719489830333259,0,1.17812402345686,5.45892700247953,7.92551605865041,1.26377536871694,0,13.1605284400894,6.33900880540533,0.545999645631943,1.55545975149084,2.26016233240486,1.10273068709225,7.96126770289464,9.20746859032902,1.15755106853338,1.31178950409327,3.85529716229138,2.78841148289775,3.66204283291914,0.860468113224309,1.17898849215745,3.92338156629375,4.61189383291777,6.96655196482292,2.96365403663912,1.51789269506286,5.59895552391973,1.34710957815717,2.01090682660736,2.17781969722645,3.10674542563371,3.87454835404107,0,1.33029046061003,3.21612760289743,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0.640944426764839,1.92495971052672,8.08632712737405,0,0,0,0,0,0.5745161103971,1.2700414963433,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0,0,3.18138918693974,6.29985170869144,0.121360521749513,0.111443384277478,0.852408440419239,7.40107902686839,0,3.37876772309155,0,0.562677665642051,4.11842208584752,0,0.211125408127993,6.17668763578316,1.65770349318689,0,1.73856760253663,0.738508832766417,11.5084647434869,2.15684042753584,0.179021174675609,0,6.21453455512682,0,3.33410970433911,0,1.02044907978036,0,1.04171104434093,0.349839999984783,5.79999660347835,0.227586896570999,1.01701460117107,1.41832609060762,0.344743373241465,0,0.347249989866585,3.54296554325536,0.60298219312704,1.52581736317083,0.110579259931225,0,0.219385397153973,1.41620002574687,2.23077990845765,1.76985594558733,3.07643550786903,1.1528195219403,0.807818799687949,0.325942115766024,6.69902435437031,1.55715908783166,2.13213910407454,0,0.31396051279005,0.166211681900156,1.1279783030859,1.17637520590644,1.1747511088309,1.13852239634511,0.158936578980379,3.37596903244843,4.73375143661528,0.424059214301822,0.216388639742091,0.995261931078505,2.56526937059684,2.4441205797345,3.85477467284809,1.11207545051853,0,0.539209063845416,3.21031058919516,0,0,1.36965233252463,2.42780379534093,0.394584402849391,0,0.30607276163049,0.505492637027904,0.300646838828985,0,5.31723098165748,4.63388738225698,3.7671950208867,4.77889719091835,0.569219092059585,0.554698692052555,3.64475450503775,1.86185555087318,1.30588809870604,0.873633341210151,0.51595809741485,0.483781656445426,0.65780385377567,0.410577285266046,4.07353869251362,1.85337866052151,1.80784592624426,1.09633539717401,0.397429223405979,0.0633107959558787,0.586654148204409,2.56508224804908,3.41524791582964,0.39961921916426,0.144090417154106,0.229073192331831,0.343189995723929,15.5579181827202,2.23654564017779,1.64985824231757,0.543616824294456,0.104602846312333,1.12198039399954,1.44475294950759,1.20084057741958,2.0535806833799,1.27746588066972,0.859530882839914,0,3.35138881526705,0,6.46085722119133,1.79711100449092,0.429226048136571,2.00854311697685,1.14211903227435,2.88239906833923,0,0.315132729228895,0.329663433524666,0.202210631562555,0.393709926058995,0.0846733320657845,0,0.544813624446302,0.160753148465019,0.275078873194468,0.415440338029185,11.9236162522295,12.3808312729272,0.0607495566580247,0.335434687599266,0.709251365692784,1.20645552710496,0.633602019116439,0.35857467866569,2.87872795979168,0,0.662091970365432,1.5256112259285,2.71499800876856,2.5926644736038,3.26587360109409,1.19730191562487,0.82092520749339,0.851940108927109,0.679872549120754,0.439656701034247,3.97520666736664,1.29282956361551,1.45455861916959,0.684347351537318,0.704815022316672,6.0868825163586,5.50215067848831,1.24271716604159,0,0.790446527591777,0,8.29843635101236,14.1444628876063,7.7713867147037,7.96498499585,8.85256102916472,0.157054096250234,0.886068179966986,1.58634144372552,0.876336514945499,5.16068276121064,0.665574309221114,0.745156835296601,0.553394539744923,0.37494122388632,2.42638588066636,6.56570267153425,5.17584803335978,0,0.434763085832475,2.08956724041624,1.63599316893057,0,4.54567212660214,2.0125432140206,8.89811221596536,8.46708253068617,3.02461847526478,5.75117642156288,2.51353754982378,4.46030948058367,6.29724357029046,2.01841843939137,4.97647449409027,2.39257543102195,7.82617592717601,3.45592500693602,2.28483127301277,1.22061219961398,3.81882184325375,3.43713782535963,13.9210127963548,7.96191777397232,2.80019435264208,1.37358282073117,1.34699795506368,0,1.34833881285112,1.50109113962448,3.13193150358254,0,0.463044948647668,3.18157715858408,0.358177682162975,0.617602894321944,0.438568099157414,1.06013487567529,0.964570191354574,0.675769762612291,0.256241518587947,0.345430341731199,1.82315973706429,0.829550616910385,2.72804432375144,1.86010776438708,2.28991551958182,1.96565909307848,1.72041036127604,2.95836972702078,0.19998739585493,0,0.172214979660816,1.13503190713367,2.39337735327393,2.37795163123056,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0.123935764259002,0,2.86203915588077,0.315446980005013,0,7.75887076119505,0.6124909547064,0.128458450192919,0,1.75597244962866,0,0.504143392443436,0.276629009856872,0,7.13847101295772,0.588886311006154,0.353909170043221,0.733714394086716,2.31051332300676,3.81382095467167,4.8325194824207,0.596748666348824,4.13656805920915,1.81534561833168,0.781514011233092,1.83334686136996,5.89578903036348,3.40068998299204,0.0675375846183947,1.56215619722769,1.86018116851066,0.253663240775627,0,0.548257766857182,3.47347824872506,0,1.02209942111676,1.07140367175657,0.336283722218824,1.21393120847326,0,7.09618961301111,0.230467975111559,1.20041606606193,0.543757863814654,0.0657727735628491,1.06374456795571,0.778619813244484,2.27629969266491,0.471346769748006,3.36326595976547,0,0.863710364874486,2.38875843943525,1.00067161847319,0.158013611732727,0.116241425368125,0,6.41369091784202,2.07216164163037,1.7071847709395,2.76503864725637,0,1.53831600949735,1.619054690424,0.846774100381858,13.517305244099,5.27350855629344,0,1.56597604516909,3.14080747568778,1.82876887473404,0.647428837187895,10.4716062993372,0,1.45713297917742,0.233939463462106,0.198950775161368,0.118920090777569,0.79062257427272,0.659643100472575,2.71733118420012,1.54348316215889,0.437119121007915,2.82190377816914,3.18692818280077,0.471353094203252,1.76677620403451,1.18818560130834,0,2.71883383500507,0.751871343838829,1.4180735354187,0.199882311849858,1.60698544745092,3.17605384544123,0.481448200135009,6.57302749421866,0,0.860037498908708,0.157771562193185,0.135982980381829,0,0,1.11598505450025,5.0839319149456,2.16313281061895,0.504665699340316,0.218531143927391,0.126698501011437,0.713921808193872,0.534434810531121,1.01084389488329,0,1.66713136080127,0.535928260312357,3.31667775783512,1.55149493792843,2.55880778281177,0.476128862927481,0.0645889098360061,0.434523000071005,2.35476911419288,1.14564884900697,2.02117188958219,1.95945073107265,1.71116650542641,1.01028079521881,5.02055437748735,1.66330178273007,1.79087190944144,5.12291260213034,5.7921684686082,1.88632924423832,2.34640942403454,1.34465588601153,0.813792356631477,7.98908129022615,1.20764276154616,0.641136984606466 | |||
|short_description=p3@MAFF | |||
}} |
Latest revision as of 07:37, 20 September 2015
Short description: | p3@MAFF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAFF_5end |
Coexpression cluster: | C4101_CD14_Eosinophils_mature_placenta_chorionic_immature_Smooth |
Association with transcript: | 54bp_to_ENST00000441709_5end |
EntrezGene: | MAFF |
HGNC: | 6780 |
UniProt: | B0QY71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-09 | 42 |
defensive cell | 8.92e-08 | 48 |
phagocyte | 8.92e-08 | 48 |
myeloid leukocyte | 1.07e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.17e-13 | 68 |
epithelial tube open at both ends | 9.93e-13 | 59 |
blood vessel | 9.93e-13 | 59 |
blood vasculature | 9.93e-13 | 59 |
vascular cord | 9.93e-13 | 59 |
artery | 2.07e-11 | 42 |
arterial blood vessel | 2.07e-11 | 42 |
arterial system | 2.07e-11 | 42 |
lateral plate mesoderm | 2.19e-11 | 203 |
vasculature | 7.23e-11 | 78 |
vascular system | 7.23e-11 | 78 |
mesoderm | 1.05e-10 | 315 |
mesoderm-derived structure | 1.05e-10 | 315 |
presumptive mesoderm | 1.05e-10 | 315 |
splanchnic layer of lateral plate mesoderm | 1.85e-10 | 83 |
systemic artery | 4.25e-09 | 33 |
systemic arterial system | 4.25e-09 | 33 |
musculoskeletal system | 9.83e-09 | 167 |
cardiovascular system | 1.74e-07 | 109 |
circulatory system | 2.42e-07 | 112 |
epithelial tube | 3.48e-07 | 117 |