FFCP PHASE1:Hg19::chr11:101454246..101454255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7225 | |EntrezGene=7225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12338 | |HGNC=12338 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJN4 | |UniProt=E9PJN4 | ||
|association_with_transcript=-9bp_to_ENST00000532133_5end | |association_with_transcript=-9bp_to_ENST00000532133_5end | ||
|cluster_id=chr11:101454246..101454255,- | |||
|description=CAGE_peak_11_at_TRPC6_5end | |description=CAGE_peak_11_at_TRPC6_5end | ||
|id=chr11:101454246..101454255,- | |id=chr11:101454246..101454255,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.60e-14;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;2.39e-66;1!DOID:3451;5.04e-34;2!DOID:4159;5.04e-34;2!DOID:0060122;5.04e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.66e-66,1;DOID:3451,7.05e-34,2;DOID:4159,7.05e-34,2;DOID:0060122,7.05e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!8.10e-09!2;UBERON:0007023!6.78e-07!115 | |ontology_enrichment_uberon=UBERON:0000341!8.10e-09!2;UBERON:0007023!6.78e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;8.69e-18;4!UBERON:0002046;1.60e-14;5!UBERON:0000310;6.13e-08;10!UBERON:0001443;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.03e-17,4;UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0000310,6.13e-08,10;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11;UBERON:0001443,2.47e-07,11 | |||
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| ||
|short_description=p11@TRPC6 | |short_description=p11@TRPC6 | ||
}} | }} |
Latest revision as of 08:01, 20 September 2015
Short description: | p11@TRPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TRPC6_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000532133_5end |
EntrezGene: | TRPC6 |
HGNC: | 12338 |
UniProt: | E9PJN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.03e-17 | 4 |
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
breast | 6.13e-08 | 10 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
chest | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.66e-66 | 1 |
skin carcinoma | 7.05e-34 | 2 |
skin cancer | 7.05e-34 | 2 |
integumentary system cancer | 7.05e-34 | 2 |