FFCP PHASE1:Hg19::chr9:119160901..119160912,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-449bp_to_AJ420467_5end | |association_with_transcript=-449bp_to_AJ420467_5end | ||
|cluster_id=chr9:119160901..119160912,+ | |||
|description=CAGE_peak_27_at_PAPPA_5end | |description=CAGE_peak_27_at_PAPPA_5end | ||
|id=chr9:119160901..119160912,+ | |id=chr9:119160901..119160912,+ | ||
|ontology_enrichment_celltype=CL:0000192!8.96e-20!42;CL:0000514!8.96e-20!42;CL:0000187!7.58e-19!54;CL:0000680!8.87e-19!57;CL:0000056!8.87e-19!57;CL:0000355!8.87e-19!57;CL:0000183!1.67e-16!59;CL:0000393!4.38e-16!60;CL:0000211!4.38e-16!60;CL:0000359!1.19e-15!32;CL:0000055!2.50e-13!180;CL:0002539!1.95e-11!10;CL:0000222!2.38e-09!119;CL:0000723!4.43e-09!436;CL:0000048!5.51e-09!430;CL:0000034!1.57e-08!444;CL:0002541!8.54e-07!3 | |ontology_enrichment_celltype=CL:0000192!8.96e-20!42;CL:0000514!8.96e-20!42;CL:0000187!7.58e-19!54;CL:0000680!8.87e-19!57;CL:0000056!8.87e-19!57;CL:0000355!8.87e-19!57;CL:0000183!1.67e-16!59;CL:0000393!4.38e-16!60;CL:0000211!4.38e-16!60;CL:0000359!1.19e-15!32;CL:0000055!2.50e-13!180;CL:0002539!1.95e-11!10;CL:0000222!2.38e-09!119;CL:0000723!4.43e-09!436;CL:0000048!5.51e-09!430;CL:0000034!1.57e-08!444;CL:0002541!8.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002539;2.61e-14;10!CL:0000359;9.42e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,2.93e-14,10;CL:0000359,7.24e-08,32 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.72e-17;1!UBERON:0005795;3.38e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!4.07e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.95e-17!61;UBERON:0002036!5.95e-17!61;UBERON:0003082!5.95e-17!61;UBERON:0002385!3.95e-16!63;UBERON:0001015!3.95e-16!63;UBERON:0000383!3.95e-16!63;UBERON:0004290!1.22e-13!70;UBERON:0001637!2.88e-13!42;UBERON:0003509!2.88e-13!42;UBERON:0004572!2.88e-13!42;UBERON:0001135!3.28e-13!15;UBERON:0000914!5.99e-13!83;UBERON:0002329!5.99e-13!83;UBERON:0003077!5.99e-13!83;UBERON:0003059!5.99e-13!83;UBERON:0007282!5.99e-13!83;UBERON:0009618!5.99e-13!83;UBERON:0007285!5.99e-13!83;UBERON:0004573!1.04e-11!33;UBERON:0004571!1.04e-11!33;UBERON:0004237!1.95e-11!10;UBERON:0004695!1.95e-11!10;UBERON:0002111!1.95e-11!10;UBERON:0004178!1.95e-11!10;UBERON:0000486!2.22e-11!82;UBERON:0004872!3.39e-11!84;UBERON:0005256!3.79e-10!143;UBERON:0000490!1.69e-09!138;UBERON:0001981!2.14e-09!60;UBERON:0007500!2.14e-09!60;UBERON:0004537!2.14e-09!60;UBERON:0006965!2.14e-09!60;UBERON:0003914!2.61e-09!118;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0004535!1.42e-08!110;UBERON:0000947!2.19e-08!21;UBERON:0010191!2.19e-08!21;UBERON:0001009!4.04e-08!113;UBERON:0002100!1.10e-07!216;UBERON:0000055!2.21e-07!69;UBERON:0000476!8.54e-07!3;UBERON:0000920!8.54e-07!3;UBERON:0002119!9.47e-07!4;UBERON:0004531!9.47e-07!4 | |ontology_enrichment_uberon=UBERON:0001134!5.95e-17!61;UBERON:0002036!5.95e-17!61;UBERON:0003082!5.95e-17!61;UBERON:0002385!3.95e-16!63;UBERON:0001015!3.95e-16!63;UBERON:0000383!3.95e-16!63;UBERON:0004290!1.22e-13!70;UBERON:0001637!2.88e-13!42;UBERON:0003509!2.88e-13!42;UBERON:0004572!2.88e-13!42;UBERON:0001135!3.28e-13!15;UBERON:0000914!5.99e-13!83;UBERON:0002329!5.99e-13!83;UBERON:0003077!5.99e-13!83;UBERON:0003059!5.99e-13!83;UBERON:0007282!5.99e-13!83;UBERON:0009618!5.99e-13!83;UBERON:0007285!5.99e-13!83;UBERON:0004573!1.04e-11!33;UBERON:0004571!1.04e-11!33;UBERON:0004237!1.95e-11!10;UBERON:0004695!1.95e-11!10;UBERON:0002111!1.95e-11!10;UBERON:0004178!1.95e-11!10;UBERON:0000486!2.22e-11!82;UBERON:0004872!3.39e-11!84;UBERON:0005256!3.79e-10!143;UBERON:0000490!1.69e-09!138;UBERON:0001981!2.14e-09!60;UBERON:0007500!2.14e-09!60;UBERON:0004537!2.14e-09!60;UBERON:0006965!2.14e-09!60;UBERON:0003914!2.61e-09!118;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0004535!1.42e-08!110;UBERON:0000947!2.19e-08!21;UBERON:0010191!2.19e-08!21;UBERON:0001009!4.04e-08!113;UBERON:0002100!1.10e-07!216;UBERON:0000055!2.21e-07!69;UBERON:0000476!8.54e-07!3;UBERON:0000920!8.54e-07!3;UBERON:0002119!9.47e-07!4;UBERON:0004531!9.47e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;2.61e-14;10!UBERON:0004695;2.61e-14;10!UBERON:0002111;2.61e-14;10!UBERON:0004178;2.61e-14;10!UBERON:0001135;9.61e-10;15!UBERON:0000947;4.10e-07;21!UBERON:0010191;4.10e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.93e-14,10;UBERON:0004695,2.93e-14,10;UBERON:0002111,2.93e-14,10;UBERON:0004178,2.93e-14,10;UBERON:0003124,6.69e-10,7;UBERON:0001135,1.04e-09,15;UBERON:0004573,1.23e-07,33;UBERON:0004571,1.23e-07,33;UBERON:0000947,4.32e-07,21;UBERON:0010191,4.32e-07,21 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.50401373190767,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,1.73675465473144,0.153461973288062,0.280660094433074,0.896974044789907,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.255679882248303,0,0,0,0,0,0.464845549297286,1.25924938732256,1.3940745403212,0.308033580176089,1.06461206063404,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.823611089208164,0.471249609382746,0,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0.641183153813036,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,1.04349012362347,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,3.28198769601764,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.50401373190767,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,1.73675465473144,0.153461973288062,0.280660094433074,0.896974044789907,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.255679882248303,0,0,0,0,0,0.464845549297286,1.25924938732256,1.3940745403212,0.308033580176089,1.06461206063404,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.823611089208164,0.471249609382746,0,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0.641183153813036,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,1.04349012362347,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,3.28198769601764,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p27@PAPPA | |short_description=p27@PAPPA | ||
}} | }} |
Latest revision as of 18:11, 24 September 2015
Short description: | p27@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PAPPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -449bp_to_AJ420467_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data