FFCP PHASE1:Hg19::chr2:219849805..219849819,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54738 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18562 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_DQ893402,DQ896784_5end | |||
|cluster_id=chr2:219849805..219849819,- | |||
|coexpression_cluster_id=C732 | |||
|description=CAGE_peak_3_at_FEV_5end | |||
|id=chr2:219849805..219849819,- | |||
|ontology_enrichment_celltype=CL:0000242!7.79e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.71e-27;2!CL:0000242;1.71e-27;2!CL:0000333;8.68e-25;5!CL:0002553;5.81e-15;1!CL:0000312;1.31e-11;5!CL:0000240;7.93e-10;6!CL:0000311;7.93e-10;6!CL:0000079;7.93e-10;6!CL:0000237;7.93e-10;6!CL:0002321;1.14e-08;15!CL:0002535;5.19e-08;2!CL:0000362;7.75e-07;9!CL:0000095;7.96e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.60e-27,2;CL:0002553,5.42e-15,1;CL:0000312,1.28e-11,5;CL:0000333,7.39e-11,41;CL:0000240,7.76e-10,6;CL:0000311,7.76e-10,6;CL:0000079,7.76e-10,6;CL:0000237,7.76e-10,6;CL:0000036,7.76e-10,6;CL:0000357,7.76e-10,6;CL:0000114,7.76e-10,6;CL:0002535,5.37e-08,2;CL:0000133,1.49e-07,59;CL:0000362,7.64e-07,9;CL:0000095,7.80e-07,17;CL:0000123,7.80e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000357;7.93e-10;6!CL:0000114;7.93e-10;6 | |||
|ontology_enrichment_disease=DOID:171!1.44e-10!10;DOID:169!3.38e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;8.91e-21;6!DOID:171;1.00e-12;10!DOID:3095;5.64e-10;22!DOID:2994;5.64e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.53e-21,6;DOID:171,1.04e-12,10;DOID:162,4.21e-11,235;DOID:14566,7.75e-11,239;DOID:3095,5.98e-10,22;DOID:2994,5.98e-10,22;DOID:0050687,3.47e-08,143;DOID:8692,4.59e-07,31;DOID:0050686,8.32e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-14!94;UBERON:0001016!1.72e-14!94;UBERON:0001049!1.99e-13!57;UBERON:0005068!1.99e-13!57;UBERON:0006241!1.99e-13!57;UBERON:0007135!1.99e-13!57;UBERON:0002020!2.31e-13!34;UBERON:0003528!2.31e-13!34;UBERON:0001893!2.43e-13!34;UBERON:0002616!7.34e-13!59;UBERON:0002780!9.43e-13!41;UBERON:0001890!9.43e-13!41;UBERON:0006240!9.43e-13!41;UBERON:0002346!1.85e-12!90;UBERON:0003080!2.16e-12!42;UBERON:0001017!2.91e-12!82;UBERON:0001869!5.85e-12!32;UBERON:0000955!6.47e-12!69;UBERON:0006238!6.47e-12!69;UBERON:0002791!1.43e-11!33;UBERON:0005743!1.64e-11!86;UBERON:0002308!1.67e-10!9;UBERON:0000125!1.67e-10!9;UBERON:0003075!2.49e-10!86;UBERON:0007284!2.49e-10!86;UBERON:0000369!2.63e-09!4;UBERON:0002435!2.63e-09!4;UBERON:0000204!2.63e-09!4;UBERON:0010082!2.63e-09!4;UBERON:0003056!3.11e-09!61;UBERON:0000924!3.34e-09!173;UBERON:0006601!3.34e-09!173;UBERON:0009663!5.20e-09!7;UBERON:0001870!6.24e-09!2;UBERON:0007023!7.15e-09!115;UBERON:0000013!1.44e-08!5;UBERON:0002410!1.44e-08!5;UBERON:0001950!3.47e-08!20;UBERON:0002298!5.11e-08!8;UBERON:0004121!1.02e-07!169;UBERON:0002619!2.14e-07!22;UBERON:0002420!5.03e-07!9;UBERON:0007245!5.03e-07!9;UBERON:0010009!5.03e-07!9;UBERON:0010011!5.03e-07!9;UBERON:0000454!5.03e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;8.68e-25;5!UBERON:0002410;8.68e-25;5!UBERON:0000010;4.53e-14;8!UBERON:0006955;5.19e-08;2!UBERON:0004801;5.19e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.41e-25,5;UBERON:0002410,9.41e-25,5;UBERON:0000010,4.73e-14,8;UBERON:0006955,5.37e-08,2;UBERON:0004801,5.37e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,11.5756035431034,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0.835218521685727,0,1.6227340708559,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,8.31378067919111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,4.86638794824577,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.496771223531068,0,0,0,0,0,6.55668868129634,8.84018274526033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,11.382599046025,7.76338642056109,0,13.4327854976177,0,0,0.247871528518004,0,0,0,13.609702720853,0,0,0.128458450192919,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0,1.73814972905999,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5181604625867,0.713520544665411,0,0.769583617218004,0,0.385870790539723,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,1.39368351112581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@FEV | |||
}} |
Latest revision as of 19:09, 24 September 2015
Short description: | p3@FEV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FEV_5end |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | -8bp_to_DQ893402, DQ896784_5end |
EntrezGene: | FEV |
HGNC: | 18562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.60e-27 | 2 |
lung fibroblast | 5.42e-15 | 1 |
keratinocyte | 1.28e-11 | 5 |
migratory neural crest cell | 7.39e-11 | 41 |
stratified squamous epithelial cell | 7.76e-10 | 6 |
keratin accumulating cell | 7.76e-10 | 6 |
stratified epithelial cell | 7.76e-10 | 6 |
keratinizing barrier epithelial cell | 7.76e-10 | 6 |
epithelial fate stem cell | 7.76e-10 | 6 |
stratified epithelial stem cell | 7.76e-10 | 6 |
surface ectodermal cell | 7.76e-10 | 6 |
epithelial cell of cervix | 5.37e-08 | 2 |
neurectodermal cell | 1.49e-07 | 59 |
epidermal cell | 7.64e-07 | 9 |
neuron associated cell | 7.80e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.80e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.41e-25 | 5 |
autonomic nervous system | 9.41e-25 | 5 |
peripheral nervous system | 4.73e-14 | 8 |
uterine epithelium | 5.37e-08 | 2 |
cervix epithelium | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.53e-21 | 6 |
neuroectodermal tumor | 1.04e-12 | 10 |
cancer | 4.21e-11 | 235 |
disease of cellular proliferation | 7.75e-11 | 239 |
germ cell and embryonal cancer | 5.98e-10 | 22 |
germ cell cancer | 5.98e-10 | 22 |
cell type cancer | 3.47e-08 | 143 |
myeloid leukemia | 4.59e-07 | 31 |
organ system cancer | 8.32e-07 | 137 |