FFCP PHASE1:Hg19::chrX:2670153..2670172,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:2670153..2670172,+
|short_description=p2@XG
|description=CAGE_peak_2_at_XG_5end
|association_with_transcript=-13bp_to_ENST00000509484_5end
|EntrezGene=749...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7499 | |EntrezGene=7499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12806 | |HGNC=12806 | ||
|TSSclassifier=strong | |||
|UniProt=E5RH28 | |UniProt=E5RH28 | ||
|association_with_transcript=-13bp_to_ENST00000509484_5end | |||
|cluster_id=chrX:2670153..2670172,+ | |||
|coexpression_cluster_id=C2028 | |||
|description=CAGE_peak_2_at_XG_5end | |||
|id=chrX:2670153..2670172,+ | |||
|ontology_enrichment_celltype=CL:0002334!8.30e-22!12;CL:1000306!2.26e-11!4;CL:0002547!2.26e-11!4;CL:0002580!1.51e-09!3;CL:0002521!7.97e-09!3;CL:0000057!3.48e-08!75;CL:0000136!4.06e-08!15;CL:0002617!7.03e-07!2;CL:0000515!9.78e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.59e-30;12!CL:1000306;4.15e-15;4!CL:0002547;4.15e-15;4!CL:0000136;2.84e-13;13!CL:0002580;1.03e-12;3!CL:0002521;1.26e-11;3!CL:0002617;5.16e-09;2!CL:0000056;6.56e-09;4!CL:0002583;1.41e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.38e-30,12;CL:1000306,2.93e-15,4;CL:0002547,2.93e-15,4;CL:0002580,1.03e-12,3;CL:0002521,1.05e-11,3;CL:0000057,1.47e-11,76;CL:0000136,2.06e-11,15;CL:0002617,5.37e-09,2;CL:0000515,6.05e-09,4;CL:0002583,1.34e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000515;6.56e-09;4 | |||
|ontology_enrichment_disease=DOID:1192!4.54e-08!3 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!1.46e-16!10;UBERON:0001443!6.58e-15!11;UBERON:0002072!9.46e-14!5;UBERON:0000415!2.26e-11!4;UBERON:0007240!2.26e-11!4;UBERON:0005742!2.26e-11!4;UBERON:0005734!2.26e-11!4;UBERON:0004664!2.26e-11!4;UBERON:0004663!2.26e-11!4;UBERON:0003975!5.31e-09!22;UBERON:0002190!7.97e-09!3;UBERON:0002199!3.43e-08!45;UBERON:0002416!3.43e-08!45;UBERON:0003134!6.63e-08!37;UBERON:0000474!6.63e-08!37;UBERON:0000995!1.04e-07!21;UBERON:0004175!1.09e-07!25;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0005795!2.76e-07!22;UBERON:0003100!7.14e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.76e-18;5!UBERON:0004797;4.15e-15;4!UBERON:0000415;4.15e-15;4!UBERON:0007240;4.15e-15;4!UBERON:0005742;4.15e-15;4!UBERON:0005734;4.15e-15;4!UBERON:0004664;4.15e-15;4!UBERON:0004663;4.15e-15;4!UBERON:0000310;1.13e-13;10!UBERON:0001443;2.31e-12;11!UBERON:0002190;1.26e-11;3!UBERON:0003688;3.64e-10;6!UBERON:0002358;3.64e-10;6!UBERON:0003684;3.64e-10;6!UBERON:0001178;3.64e-10;6!UBERON:0002199;1.68e-09;46!UBERON:0002416;1.68e-09;46!UBERON:0004457;8.85e-07;9!UBERON:0000042;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.39e-18,5;UBERON:0000415,2.93e-15,4;UBERON:0007240,2.93e-15,4;UBERON:0005742,2.93e-15,4;UBERON:0005734,2.93e-15,4;UBERON:0004664,2.93e-15,4;UBERON:0004663,2.93e-15,4;UBERON:0000310,1.19e-13,10;UBERON:0001443,2.43e-12,11;UBERON:0002190,1.05e-11,3;UBERON:0002199,1.81e-10,46;UBERON:0002416,1.81e-10,46;UBERON:0003688,3.59e-10,6;UBERON:0002358,3.59e-10,6;UBERON:0003684,3.59e-10,6;UBERON:0001178,3.59e-10,6;UBERON:0004797,9.73e-09,7;UBERON:0004923,1.04e-07,66;UBERON:0003102,1.19e-07,99 | |||
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| ||
|short_description=p2@XG | |||
}} | }} |
Latest revision as of 19:17, 24 September 2015
Short description: | p2@XG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XG_5end |
Coexpression cluster: | C2028_peripheral_Preadipocyte_Adipocyte_Gingival_Smooth_leiomyoma_Fibroblast |
Association with transcript: | -13bp_to_ENST00000509484_5end |
EntrezGene: | XG |
HGNC: | 12806 |
UniProt: | E5RH28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.38e-30 | 12 |
fibroblast of tunica adventitia of artery | 2.93e-15 | 4 |
fibroblast of the aortic adventitia | 2.93e-15 | 4 |
preadipocyte of the breast | 1.03e-12 | 3 |
subcutaneous fat cell | 1.05e-11 | 3 |
fibroblast | 1.47e-11 | 76 |
fat cell | 2.06e-11 | 15 |
adipocyte of breast | 5.37e-09 | 2 |
skeletal muscle myoblast | 6.05e-09 | 4 |
subcutaneous preadipocyte | 1.34e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 1.39e-18 | 5 |
artery wall | 2.93e-15 | 4 |
tunica adventitia of artery | 2.93e-15 | 4 |
adventitia | 2.93e-15 | 4 |
tunica adventitia of blood vessel | 2.93e-15 | 4 |
aorta tunica adventitia | 2.93e-15 | 4 |
aorta wall | 2.93e-15 | 4 |
breast | 1.19e-13 | 10 |
chest | 2.43e-12 | 11 |
subcutaneous adipose tissue | 1.05e-11 | 3 |
integument | 1.81e-10 | 46 |
integumental system | 1.81e-10 | 46 |
omentum | 3.59e-10 | 6 |
peritoneum | 3.59e-10 | 6 |
abdominal cavity | 3.59e-10 | 6 |
visceral peritoneum | 3.59e-10 | 6 |
blood vessel layer | 9.73e-09 | 7 |
organ component layer | 1.04e-07 | 66 |
surface structure | 1.19e-07 | 99 |