FFCP PHASE1:Hg19::chr3:130650720..130650730,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27032 | |EntrezGene=27032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |HGNC=13211 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-157bp_to_ENST00000504612_5end | |association_with_transcript=-157bp_to_ENST00000504612_5end | ||
|cluster_id=chr3:130650720..130650730,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_26_at_ATP2C1_5end | |description=CAGE_peak_26_at_ATP2C1_5end | ||
|id=chr3:130650720..130650730,+ | |id=chr3:130650720..130650730,+ | ||
|ontology_enrichment_celltype=CL:0000064!7.42e-11!3;CL:0005012!7.42e-11!3;CL:0000067!7.42e-11!3;CL:0002304!7.42e-11!3;CL:0000243!1.06e-07!15;CL:0000125!1.06e-07!15;CL:0000030!1.06e-07!15;CL:0000339!1.06e-07!15;CL:0000095!5.50e-07!17;CL:0000123!5.50e-07!17 | |ontology_enrichment_celltype=CL:0000064!7.42e-11!3;CL:0005012!7.42e-11!3;CL:0000067!7.42e-11!3;CL:0002304!7.42e-11!3;CL:0000243!1.06e-07!15;CL:0000125!1.06e-07!15;CL:0000030!1.06e-07!15;CL:0000339!1.06e-07!15;CL:0000095!5.50e-07!17;CL:0000123!5.50e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease=DOID:3093!1.60e-10!11;DOID:5409!2.43e-08!4 | |ontology_enrichment_disease=DOID:3093!1.60e-10!11;DOID:5409!2.43e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.81e-23!5;UBERON:0005388!1.81e-23!5;UBERON:0001802!1.81e-23!5;UBERON:0001873!1.78e-15!2;UBERON:0010122!1.78e-15!2;UBERON:0000019!3.96e-14!19;UBERON:0000047!3.96e-14!19;UBERON:0004088!3.96e-14!19;UBERON:0003072!3.96e-14!19;UBERON:0003071!3.96e-14!19;UBERON:0004128!3.96e-14!19;UBERON:0000970!1.84e-13!20;UBERON:0002104!7.43e-13!21;UBERON:0001456!7.43e-13!21;UBERON:0000020!8.40e-12!23;UBERON:0001032!2.43e-11!24;UBERON:0004456!2.43e-11!24;UBERON:0001778!7.42e-11!3;UBERON:0001775!7.42e-11!3;UBERON:0005383!8.99e-11!3;UBERON:0005382!8.99e-11!3;UBERON:0005085!1.66e-09!29;UBERON:0000488!1.82e-08!4;UBERON:0000369!2.11e-08!4;UBERON:0002435!2.11e-08!4;UBERON:0000204!2.11e-08!4;UBERON:0010082!2.11e-08!4;UBERON:0003056!8.61e-08!61;UBERON:0002046!6.04e-07!5;UBERON:0004117!6.04e-07!5;UBERON:0007689!6.04e-07!5;UBERON:0007123!6.04e-07!5;UBERON:0003091!6.04e-07!5 | |ontology_enrichment_uberon=UBERON:0000966!1.81e-23!5;UBERON:0005388!1.81e-23!5;UBERON:0001802!1.81e-23!5;UBERON:0001873!1.78e-15!2;UBERON:0010122!1.78e-15!2;UBERON:0000019!3.96e-14!19;UBERON:0000047!3.96e-14!19;UBERON:0004088!3.96e-14!19;UBERON:0003072!3.96e-14!19;UBERON:0003071!3.96e-14!19;UBERON:0004128!3.96e-14!19;UBERON:0000970!1.84e-13!20;UBERON:0002104!7.43e-13!21;UBERON:0001456!7.43e-13!21;UBERON:0000020!8.40e-12!23;UBERON:0001032!2.43e-11!24;UBERON:0004456!2.43e-11!24;UBERON:0001778!7.42e-11!3;UBERON:0001775!7.42e-11!3;UBERON:0005383!8.99e-11!3;UBERON:0005382!8.99e-11!3;UBERON:0005085!1.66e-09!29;UBERON:0000488!1.82e-08!4;UBERON:0000369!2.11e-08!4;UBERON:0002435!2.11e-08!4;UBERON:0000204!2.11e-08!4;UBERON:0010082!2.11e-08!4;UBERON:0003056!8.61e-08!61;UBERON:0002046!6.04e-07!5;UBERON:0004117!6.04e-07!5;UBERON:0007689!6.04e-07!5;UBERON:0007123!6.04e-07!5;UBERON:0003091!6.04e-07!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144962551535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144962551535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p26@ATP2C1 | |short_description=p26@ATP2C1 | ||
}} | }} |
Latest revision as of 19:21, 24 September 2015
Short description: | p26@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ATP2C1_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -157bp_to_ENST00000504612_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |