FFCP PHASE1:Hg19::chr1:209796957..209796972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100422894 | |EntrezGene=100422894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=38179 | |HGNC=38179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-102bp_to_NR_036213_5end | |||
|cluster_id=chr1:209796957..209796972,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_4_at_MIR4260_5end | |||
|id=chr1:209796957..209796972,- | |||
|ontology_enrichment_celltype=CL:0002159!5.93e-17!13;CL:0002368!1.99e-12!13;CL:0000575!7.77e-11!2;CL:0002076!4.83e-09!43;CL:0000066!4.38e-08!254;CL:0002077!6.58e-08!33;CL:0000240!1.39e-07!6;CL:0000311!1.39e-07!6;CL:0000079!1.39e-07!6;CL:0000237!1.39e-07!6;CL:0000036!1.39e-07!6;CL:0000357!1.39e-07!6;CL:0000114!1.39e-07!6;CL:0002231!4.13e-07!3;CL:0002166!4.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.00e-40;10!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22!DOID:169;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.00e-40,10;DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22;DOID:169,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0003937!2.64e-09!12;UBERON:0005399!2.64e-09!12;UBERON:0005157!3.15e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.14e-26;4!UBERON:0000923;7.14e-26;4!UBERON:0010316;7.14e-26;4!UBERON:0005291;7.14e-26;4!UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0002050;5.15e-21;5!UBERON:0005423;5.15e-21;5!UBERON:0000010;2.19e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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| ||
|short_description=p4@MIR4260 | |||
}} | }} |
Latest revision as of 19:24, 24 September 2015
Short description: | p4@MIR4260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MIR4260_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | -102bp_to_NR_036213_5end |
EntrezGene: | MIR4260 |
HGNC: | 38179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.00e-40 | 10 |
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |
neuroendocrine tumor | 7.67e-18 | 6 |