FFCP PHASE1:Hg19::chr6:133008425..133008434,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8876 | |EntrezGene=8876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12705 | |HGNC=12705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_uc003qdn.2_5end | |association_with_transcript=82bp_to_uc003qdn.2_5end | ||
|cluster_id=chr6:133008425..133008434,- | |||
|coexpression_cluster_id=C2842 | |coexpression_cluster_id=C2842 | ||
|description=CAGE_peak_5_at_VNN1_5end | |description=CAGE_peak_5_at_VNN1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002619!2.51e-14!3;CL:0002621!1.29e-13!3 | |ontology_enrichment_celltype=CL:0002619!2.51e-14!3;CL:0002621!1.29e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.29e-74;3!CL:0002097;1.21e-13;2!CL:0000174;1.53e-09;3!CL:0000083;1.40e-07;4!CL:0002078;2.88e-07;45 | |ontology_enrichment_celltype_v019=CL:0002619;1.29e-74;3!CL:0002097;1.21e-13;2!CL:0000174;1.53e-09;3!CL:0000083;1.40e-07;4!CL:0002078;2.88e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.14e-74,3;CL:0002097,1.21e-13,2;CL:0000213,6.12e-11,58;CL:0000215,6.12e-11,58;CL:0000174,1.54e-09,3;CL:0002078,2.96e-09,45;CL:0000083,1.40e-07,4;CL:0000115,7.08e-07,36 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.11e-10!14;DOID:120!1.18e-08!27;DOID:193!5.72e-08!29 | |ontology_enrichment_disease=DOID:2394!3.11e-10!14;DOID:120!1.18e-08!27;DOID:193!5.72e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:170;1.57e-17;6!DOID:4929;7.30e-14;2!DOID:1793;1.40e-07;4 | |ontology_enrichment_disease_v019=DOID:170;1.57e-17;6!DOID:4929;7.30e-14;2!DOID:1793;1.40e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:170,1.57e-17,6;DOID:4929,7.30e-14,2;DOID:1793,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.29e-13!3;UBERON:0002119!8.70e-10!4;UBERON:0004531!8.70e-10!4 | |ontology_enrichment_uberon=UBERON:0001949!1.29e-13!3;UBERON:0002119!8.70e-10!4;UBERON:0004531!8.70e-10!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.53e-09;3!UBERON:0001235;1.53e-09;3!UBERON:0006858;1.53e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002369;1.53e-09;3!UBERON:0001235;1.53e-09;3!UBERON:0006858;1.53e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.54e-09,3;UBERON:0001235,1.54e-09,3;UBERON:0006858,1.54e-09,3 | |||
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| ||
|short_description=p5@VNN1 | |short_description=p5@VNN1 | ||
}} | }} |
Latest revision as of 19:57, 24 September 2015
Short description: | p5@VNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VNN1_5end |
Coexpression cluster: | C2842_tubular_Mesothelial_CD14_giant_mesenchymal_mesothelioma_Gingival |
Association with transcript: | 82bp_to_uc003qdn.2_5end |
EntrezGene: | VNN1 |
HGNC: | 12705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.14e-74 | 3 |
cortical cell of adrenal gland | 1.21e-13 | 2 |
lining cell | 6.12e-11 | 58 |
barrier cell | 6.12e-11 | 58 |
steroid hormone secreting cell | 1.54e-09 | 3 |
meso-epithelial cell | 2.96e-09 | 45 |
epithelial cell of pancreas | 1.40e-07 | 4 |
endothelial cell | 7.08e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.54e-09 | 3 |
adrenal cortex | 1.54e-09 | 3 |
adrenal/interrenal gland | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 1.57e-17 | 6 |
tubular adenocarcinoma | 7.30e-14 | 2 |
pancreatic cancer | 1.40e-07 | 4 |