FFCP PHASE1:Hg19::chr6:133008425..133008434,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12705 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=82bp_to_uc003qdn.2_5end | |||
|cluster_id=chr6:133008425..133008434,- | |||
|coexpression_cluster_id=C2842 | |||
|description=CAGE_peak_5_at_VNN1_5end | |||
|id=chr6:133008425..133008434,- | |||
|ontology_enrichment_celltype=CL:0002619!2.51e-14!3;CL:0002621!1.29e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.29e-74;3!CL:0002097;1.21e-13;2!CL:0000174;1.53e-09;3!CL:0000083;1.40e-07;4!CL:0002078;2.88e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.14e-74,3;CL:0002097,1.21e-13,2;CL:0000213,6.12e-11,58;CL:0000215,6.12e-11,58;CL:0000174,1.54e-09,3;CL:0002078,2.96e-09,45;CL:0000083,1.40e-07,4;CL:0000115,7.08e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.11e-10!14;DOID:120!1.18e-08!27;DOID:193!5.72e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:170;1.57e-17;6!DOID:4929;7.30e-14;2!DOID:1793;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:170,1.57e-17,6;DOID:4929,7.30e-14,2;DOID:1793,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.29e-13!3;UBERON:0002119!8.70e-10!4;UBERON:0004531!8.70e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.53e-09;3!UBERON:0001235;1.53e-09;3!UBERON:0006858;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.54e-09,3;UBERON:0001235,1.54e-09,3;UBERON:0006858,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47830948479849,2.91504299417082,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,1.1524383839052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.899606224327209,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,1.50374779859484,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.244209805832924,0,0,3.86248369058324,0,0,0,0,0,0 | |||
|short_description=p5@VNN1 | |||
}} |
Latest revision as of 19:57, 24 September 2015
Short description: | p5@VNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VNN1_5end |
Coexpression cluster: | C2842_tubular_Mesothelial_CD14_giant_mesenchymal_mesothelioma_Gingival |
Association with transcript: | 82bp_to_uc003qdn.2_5end |
EntrezGene: | VNN1 |
HGNC: | 12705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.14e-74 | 3 |
cortical cell of adrenal gland | 1.21e-13 | 2 |
lining cell | 6.12e-11 | 58 |
barrier cell | 6.12e-11 | 58 |
steroid hormone secreting cell | 1.54e-09 | 3 |
meso-epithelial cell | 2.96e-09 | 45 |
epithelial cell of pancreas | 1.40e-07 | 4 |
endothelial cell | 7.08e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.54e-09 | 3 |
adrenal cortex | 1.54e-09 | 3 |
adrenal/interrenal gland | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 1.57e-17 | 6 |
tubular adenocarcinoma | 7.30e-14 | 2 |
pancreatic cancer | 1.40e-07 | 4 |