FFCP PHASE1:Hg19::chr18:907556..907570,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:907556..907570,+ | |||
|coexpression_cluster_id=C1806 | |||
|description=CAGE_peak_at_chr18:907556..907570,+ | |description=CAGE_peak_at_chr18:907556..907570,+ | ||
|id=chr18:907556..907570,+ | |id=chr18:907556..907570,+ | ||
|ontology_enrichment_celltype=CL:0000077!7.17e-15!19;CL:0002319!8.11e-08!25;CL:0000242!1.20e-07!2 | |ontology_enrichment_celltype=CL:0000077!7.17e-15!19;CL:0002319!8.11e-08!25;CL:0000242!1.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.84e-20;19!CL:0000333;3.03e-13;5!CL:0000123;6.17e-09;2!CL:0002097;6.17e-09;2!CL:0000242;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.92e-20,19;CL:0002097,5.94e-09,2;CL:0000242,7.49e-09,2;CL:0000076,1.74e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;3.39e-11;6!DOID:171;4.52e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.91e-11,6;DOID:162,3.16e-08,235;DOID:14566,4.97e-08,239;DOID:171,4.13e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.11e-15!94;UBERON:0001016!3.11e-15!94;UBERON:0005743!2.48e-14!86;UBERON:0001017!1.86e-12!82;UBERON:0003075!1.18e-10!86;UBERON:0007284!1.18e-10!86;UBERON:0001049!3.25e-10!57;UBERON:0005068!3.25e-10!57;UBERON:0006241!3.25e-10!57;UBERON:0007135!3.25e-10!57;UBERON:0002346!5.87e-10!90;UBERON:0002616!9.61e-10!59;UBERON:0002791!1.52e-09!33;UBERON:0001950!1.64e-09!20;UBERON:0000956!3.33e-09!25;UBERON:0000203!3.33e-09!25;UBERON:0001893!3.35e-09!34;UBERON:0000955!1.00e-08!69;UBERON:0006238!1.00e-08!69;UBERON:0002619!1.52e-08!22;UBERON:0001869!2.58e-08!32;UBERON:0004121!4.83e-08!169;UBERON:0002020!1.02e-07!34;UBERON:0003528!1.02e-07!34;UBERON:0000924!1.05e-07!173;UBERON:0006601!1.05e-07!173;UBERON:0002780!2.91e-07!41;UBERON:0001890!2.91e-07!41;UBERON:0006240!2.91e-07!41;UBERON:0003080!4.87e-07!42;UBERON:0002360!7.90e-07!2;UBERON:0000094!7.90e-07!2;UBERON:0007645!7.90e-07!2 | |ontology_enrichment_uberon=UBERON:0000073!3.11e-15!94;UBERON:0001016!3.11e-15!94;UBERON:0005743!2.48e-14!86;UBERON:0001017!1.86e-12!82;UBERON:0003075!1.18e-10!86;UBERON:0007284!1.18e-10!86;UBERON:0001049!3.25e-10!57;UBERON:0005068!3.25e-10!57;UBERON:0006241!3.25e-10!57;UBERON:0007135!3.25e-10!57;UBERON:0002346!5.87e-10!90;UBERON:0002616!9.61e-10!59;UBERON:0002791!1.52e-09!33;UBERON:0001950!1.64e-09!20;UBERON:0000956!3.33e-09!25;UBERON:0000203!3.33e-09!25;UBERON:0001893!3.35e-09!34;UBERON:0000955!1.00e-08!69;UBERON:0006238!1.00e-08!69;UBERON:0002619!1.52e-08!22;UBERON:0001869!2.58e-08!32;UBERON:0004121!4.83e-08!169;UBERON:0002020!1.02e-07!34;UBERON:0003528!1.02e-07!34;UBERON:0000924!1.05e-07!173;UBERON:0006601!1.05e-07!173;UBERON:0002780!2.91e-07!41;UBERON:0001890!2.91e-07!41;UBERON:0006240!2.91e-07!41;UBERON:0003080!4.87e-07!42;UBERON:0002360!7.90e-07!2;UBERON:0000094!7.90e-07!2;UBERON:0007645!7.90e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.03e-13;5!UBERON:0002410;3.03e-13;5!UBERON:0000010;9.20e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.52e-13,5;UBERON:0002410,2.52e-13,5;UBERON:0000010,8.31e-08,8 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,2.19418305034661,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7106594546787,2.79411120005943,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0.936669811613763,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57329909649911,9.91778309467804,2.26705925512272,0.231522474323834,0,0,0.308801447160972,7.01708958651863,0,0.38582807654183,1.01365464391844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06946491128764,2.91126990771041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0.109940516745429,3.01925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:907556..907570,+ | |short_description=p@chr18:907556..907570,+ | ||
}} | }} |
Latest revision as of 21:15, 24 September 2015
Short description: | p@chr18:907556..907570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:907556..907570, + |
Coexpression cluster: | C1806_acute_mesothelioma_small_neuroblastoma_Astrocyte_hepatoma_gastrointestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.92e-20 | 19 |
cortical cell of adrenal gland | 5.94e-09 | 2 |
Merkel cell | 7.49e-09 | 2 |
squamous epithelial cell | 1.74e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.52e-13 | 5 |
autonomic nervous system | 2.52e-13 | 5 |
peripheral nervous system | 8.31e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.91e-11 | 6 |
cancer | 3.16e-08 | 235 |
disease of cellular proliferation | 4.97e-08 | 239 |
neuroectodermal tumor | 4.13e-07 | 10 |