FFCP PHASE1:Hg19::chr18:907582..907595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:907582..907595,+ | |||
|coexpression_cluster_id=C1806 | |coexpression_cluster_id=C1806 | ||
|description=CAGE_peak_at_chr18:907582..907595,+ | |description=CAGE_peak_at_chr18:907582..907595,+ | ||
|id=chr18:907582..907595,+ | |id=chr18:907582..907595,+ | ||
|ontology_enrichment_celltype=CL:0000077;8.06e-25;19!CL:0000333;1.00e-11;5!CL:0000123;7.52e-08;2!CL:0002097;7.52e-08;2!CL:0000242;7.52e-08;2 | |ontology_enrichment_celltype=CL:0000077!4.22e-20!19;CL:0000128!1.56e-09!7;CL:0000126!1.56e-09!7;CL:0000127!1.56e-09!7;CL:0002453!1.56e-09!7;CL:0000242!3.10e-09!2;CL:0000333!1.40e-07!41;CL:0000095!3.62e-07!17;CL:0000123!3.62e-07!17;CL:0000076!4.28e-07!62 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;8.06e-25;19!CL:0000333;1.00e-11;5!CL:0000123;7.52e-08;2!CL:0002097;7.52e-08;2!CL:0000242;7.52e-08;2 | ||
|ontology_enrichment_disease=DOID:169;6.35e-10;6 | |ontology_enrichment_celltype_v019_2=CL:0000077,7.90e-25,19;CL:0000076,9.48e-10,63;CL:0000213,6.02e-08,58;CL:0000215,6.02e-08,58;CL:0002097,7.52e-08,2;CL:0000242,9.19e-08,2 | ||
|ontology_enrichment_uberon=UBERON:0000013;1.00e-11;5!UBERON:0002410;1.00e-11;5!UBERON:0000010;6.69e-07;8 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.35e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.21e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.26e-17!57;UBERON:0005068!3.26e-17!57;UBERON:0006241!3.26e-17!57;UBERON:0007135!3.26e-17!57;UBERON:0002616!1.90e-14!59;UBERON:0000073!1.08e-12!94;UBERON:0001016!1.08e-12!94;UBERON:0001017!4.49e-12!82;UBERON:0000955!1.29e-11!69;UBERON:0006238!1.29e-11!69;UBERON:0003075!1.59e-11!86;UBERON:0007284!1.59e-11!86;UBERON:0005743!2.50e-11!86;UBERON:0002791!2.91e-11!33;UBERON:0002020!6.37e-11!34;UBERON:0003528!6.37e-11!34;UBERON:0001893!7.03e-11!34;UBERON:0002346!7.90e-11!90;UBERON:0002780!1.72e-10!41;UBERON:0001890!1.72e-10!41;UBERON:0006240!1.72e-10!41;UBERON:0003080!3.43e-10!42;UBERON:0001869!1.23e-09!32;UBERON:0003076!4.67e-09!15;UBERON:0003057!4.67e-09!15;UBERON:0000956!3.22e-08!25;UBERON:0000203!3.22e-08!25;UBERON:0004733!4.67e-08!12;UBERON:0002028!4.67e-08!12;UBERON:0007277!4.67e-08!12;UBERON:0004121!1.79e-07!169;UBERON:0004732!2.06e-07!13;UBERON:0002680!3.19e-07!9;UBERON:0001895!3.19e-07!9;UBERON:0010092!3.19e-07!9;UBERON:0000924!3.48e-07!173;UBERON:0006601!3.48e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.00e-11;5!UBERON:0002410;1.00e-11;5!UBERON:0000010;6.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.77e-12,5;UBERON:0002410,9.77e-12,5;UBERON:0000010,6.60e-07,8 | |||
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| ||
|short_description=p@chr18:907582..907595,+ | |short_description=p@chr18:907582..907595,+ | ||
}} | }} |
Latest revision as of 21:16, 24 September 2015
Short description: | p@chr18:907582..907595, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:907582..907595, + |
Coexpression cluster: | C1806_acute_mesothelioma_small_neuroblastoma_Astrocyte_hepatoma_gastrointestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.90e-25 | 19 |
squamous epithelial cell | 9.48e-10 | 63 |
lining cell | 6.02e-08 | 58 |
barrier cell | 6.02e-08 | 58 |
cortical cell of adrenal gland | 7.52e-08 | 2 |
Merkel cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.77e-12 | 5 |
autonomic nervous system | 9.77e-12 | 5 |
peripheral nervous system | 6.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.21e-10 | 6 |