FFCP PHASE1:Hg19::chr19:11200194..11200207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3949 | |EntrezGene=3949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6547 | |HGNC=6547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000558013_5end | |association_with_transcript=40bp_to_ENST00000558013_5end | ||
|cluster_id=chr19:11200194..11200207,+ | |||
|coexpression_cluster_id=C2475 | |||
|description=CAGE_peak_5_at_LDLR_5end | |description=CAGE_peak_5_at_LDLR_5end | ||
|id=chr19:11200194..11200207,+ | |id=chr19:11200194..11200207,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.71e-14!682;CL:0000548!8.11e-14!679;CL:0000004!8.11e-14!679;CL:0000255!8.11e-14!679;CL:0000144!3.42e-13!625;CL:0002371!6.75e-13!591;CL:0000063!5.51e-08!578;CL:0000220!1.15e-07!246;CL:0002321!1.58e-07!248;CL:0000003!1.60e-07!722;CL:0002057!6.40e-07!42 | |ontology_enrichment_celltype=CL:0000012!1.71e-14!682;CL:0000548!8.11e-14!679;CL:0000004!8.11e-14!679;CL:0000255!8.11e-14!679;CL:0000144!3.42e-13!625;CL:0002371!6.75e-13!591;CL:0000063!5.51e-08!578;CL:0000220!1.15e-07!246;CL:0002321!1.58e-07!248;CL:0000003!1.60e-07!722;CL:0002057!6.40e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.25e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.48e-07!118 | |ontology_enrichment_uberon=UBERON:0003914!9.48e-07!118 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@LDLR | |short_description=p5@LDLR | ||
}} | }} |
Latest revision as of 04:15, 25 September 2015
Short description: | p5@LDLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDLR_5end |
Coexpression cluster: | C2475_immature_mature_Small_serous_Bronchial_Alveolar_Tracheal |
Association with transcript: | 40bp_to_ENST00000558013_5end |
EntrezGene: | LDLR |
HGNC: | 6547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.25e-08 | 250 |