FFCP PHASE1:Hg19::chr17:45908954..45908971,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:45908954..45908971,+
|short_description=p4@LRRC46
|description=CAGE_peak_4_at_LRRC46_5end
|association_with_transcript=-21bp_to_ENST00000269025,NM_033413_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90506 | |EntrezGene=90506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25047 | |HGNC=25047 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FV0,A8K9Q0 | |UniProt=Q96FV0,A8K9Q0 | ||
|association_with_transcript=-21bp_to_ENST00000269025,NM_033413_5end | |||
|cluster_id=chr17:45908954..45908971,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_LRRC46_5end | |||
|id=chr17:45908954..45908971,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.78e-10;17!CL:0002518;3.78e-10;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.55e-10,17;CL:0002518,3.55e-10,17 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.53e-08;10!UBERON:0005564;2.53e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.89e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.89e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11!UBERON:0002113;2.35e-07;24!UBERON:0011143;2.35e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.52e-10,8;UBERON:0003135,1.20e-07,11;UBERON:0002113,7.56e-07,26;UBERON:0003918,7.56e-07,26;UBERON:0011143,7.56e-07,26;UBERON:0005095,7.56e-07,26;UBERON:0007687,7.56e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0,0,0.485168122375632,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,12.9014389365247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0,0.288239906833923,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0.432807638929335,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0.614481528616916,0.223676107892416,0,0,0.556812347790485,0,0.270455678475983,0.33307196799782,0,0,0,0.728163130497081,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,1.04171104434093,0.174919999992391,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0.588187602953219,0.167821586975843,0,0,5.90794580678476,0.163232808159148,0,0,0,0.176915129006678,0,0.296521128680622,0,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0.261177619741208,0.52418000472609,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,1.80784592624426,0.137041924646751,0.19871461170299,0,0,0.240476460754601,0.640358984218058,0,0.144090417154106,0.687219576995494,0.343189995723929,0,0,0.471388069233591,0.543616824294456,0.627617077873999,0.203996435272644,0,0,0.684526894459965,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0.5085370753095,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0.684347351537318,0,0,0.314408610199332,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.628216385000937,0,0,0.250381861413,0,0,0.18628920882415,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0,0,0,0.633936370075881,0,0.213383459388282,0.344429959321631,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.319267718114302,0,0,0.207471757392654,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.317079050969534,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0.115233987555779,0,0,0,0,0.222462803784138,0,0,0,0,2.59113109462346,0,0.571812353413251,0,0,0,0.801711364730253,0.207216164163037,0,0,0.430227358820278,0,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0,0.098150233615243,0,0,0.102662806856247,1.1598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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0,0,0.485168122375632,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,12.9014389365247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0,0.288239906833923,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0.432807638929335,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0.614481528616916,0.223676107892416,0,0,0.556812347790485,0,0.270455678475983,0.33307196799782,0,0,0,0.728163130497081,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,1.04171104434093,0.174919999992391,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0.588187602953219,0.167821586975843,0,0,5.90794580678476,0.163232808159148,0,0,0,0.176915129006678,0,0.296521128680622,0,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0.261177619741208,0.52418000472609,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,1.80784592624426,0.137041924646751,0.19871461170299,0,0,0.240476460754601,0.640358984218058,0,0.144090417154106,0.687219576995494,0.343189995723929,0,0,0.471388069233591,0.543616824294456,0.627617077873999,0.203996435272644,0,0,0.684526894459965,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0.5085370753095,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0.684347351537318,0,0,0.314408610199332,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.628216385000937,0,0,0.250381861413,0,0,0.18628920882415,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0,0,0,0.633936370075881,0,0.213383459388282,0.344429959321631,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.319267718114302,0,0,0.207471757392654,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.317079050969534,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0.115233987555779,0,0,0,0,0.222462803784138,0,0,0,0,2.59113109462346,0,0.571812353413251,0,0,0,0.801711364730253,0.207216164163037,0,0,0.430227358820278,0,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0,0.098150233615243,0,0,0.102662806856247,1.1598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| ||
|short_description=p4@LRRC46 | |||
}} | }} |
Latest revision as of 04:30, 25 September 2015
Short description: | p4@LRRC46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC46_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -21bp_to_ENST00000269025, NM_033413_5end |
EntrezGene: | LRRC46 |
HGNC: | 25047 |
UniProt: | Q96FV0A8K9Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.55e-10 | 17 |
kidney epithelial cell | 3.55e-10 | 17 |
Ontology term | p-value | n |
---|---|---|
testis | 3.52e-10 | 8 |
male reproductive organ | 1.20e-07 | 11 |
kidney | 7.56e-07 | 26 |
kidney mesenchyme | 7.56e-07 | 26 |
upper urinary tract | 7.56e-07 | 26 |
kidney rudiment | 7.56e-07 | 26 |
kidney field | 7.56e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.89e-10 | 2 |