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FFCP PHASE1:Mm9::chr16:44016432..44016497,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=207798
|EntrezGene=207798
|HGNC=
|HGNC=
|MCL_coexpression_id=3051
|MCL_coexpression_id=3051
|TSSclassifier=NA
|UniProt=Q8CI52
|UniProt=Q8CI52
|association_with_transcript=51bp_to_ENSMUST00000036174,NM_153528,uc007zgt.2_5end
|association_with_transcript=51bp_to_ENSMUST00000036174,NM_153528,uc007zgt.2_5end
|cluster_id=chr16:44016432..44016497,-
|description=CAGE_peak_1_at_Gramd1c_5end
|description=CAGE_peak_1_at_Gramd1c_5end
|id=chr16:44016432..44016497,-
|id=chr16:44016432..44016497,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!9.39e-20!130;UBERON:0000925!9.39e-20!130;UBERON:0006595!9.39e-20!130;UBERON:0001007!4.76e-19!128;UBERON:0001555!4.76e-19!128;UBERON:0007026!4.76e-19!128;UBERON:0004921!8.40e-18!126;UBERON:0004185!8.40e-18!126;UBERON:0005409!1.85e-17!59;UBERON:0000160!1.26e-14!43;UBERON:0004923!1.06e-08!24;UBERON:0000344!1.13e-08!15;UBERON:0001242!2.26e-07!13;UBERON:0000060!2.26e-07!13;UBERON:0001262!2.26e-07!13;UBERON:0004786!2.26e-07!13;UBERON:0000077!7.13e-07!97
|ontology_enrichment_uberon=UBERON:0004119!9.39e-20!130;UBERON:0000925!9.39e-20!130;UBERON:0006595!9.39e-20!130;UBERON:0001007!4.76e-19!128;UBERON:0001555!4.76e-19!128;UBERON:0007026!4.76e-19!128;UBERON:0004921!8.40e-18!126;UBERON:0004185!8.40e-18!126;UBERON:0005409!1.85e-17!59;UBERON:0000160!1.26e-14!43;UBERON:0004923!1.06e-08!24;UBERON:0000344!1.13e-08!15;UBERON:0001242!2.26e-07!13;UBERON:0000060!2.26e-07!13;UBERON:0001262!2.26e-07!13;UBERON:0004786!2.26e-07!13;UBERON:0000077!7.13e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.73e-17,118;UBERON:0000925,2.73e-17,118;UBERON:0006595,2.73e-17,118;UBERON:0001007,1.26e-16,116;UBERON:0001555,1.26e-16,116;UBERON:0007026,1.26e-16,116;UBERON:0005409,1.73e-16,47;UBERON:0004921,1.93e-15,114;UBERON:0000160,4.35e-14,31;UBERON:0004923,7.50e-09,24;UBERON:0000344,8.02e-09,15;UBERON:0001242,1.71e-07,13;UBERON:0001262,1.71e-07,13;UBERON:0004786,1.71e-07,13
|phase1_expression=5.12476310735341,60.7217209292488,38.6749353481106,32.6661348211376,42.0752413154932,8.39396359559449,11.4470193891808,5.4231795845462,0.703943610758334,0.468129052643987,1.02730780935303,1.67521533890206,5.13602189793617,5.50748535239684,1.99865857089398,4.85940641735582,1.39912375625629,6.15151222448563,4.79900517620086,6.79023442876848,1.36069264241712,5.36171136484781,1.82839852397255,40.7980678123187,37.852531376083,29.860062133981,22.3996238002719,28.8731451799091,21.2826229791139,26.2111334950328,13.082100128663,5.71527606113668,7.99584223859941,0,5.77703239502549,4.3221007793208,5.3084032628216,1.67412652294763,0.7813353445238,1.57057123192139,1.17646297606203,2.04913645487534,0.485510353031154,0.503587271902309,0.811015449756117,0.734187008646726,0,0,0.219686182734472,0,0,0,2.68452169692378,2.90144856804538,6.04968838456435,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.0755715601067855,7.8263411949453,0.860423876981386,6.11974200336975,3.77792234146472,1.94932925234301,2.68816132258401,7.72444310724635,0,0,0,5.35204995151386,0,0,0,4.97929394325792,4.05375784760158,1.01104889002957,9.81981365583916,4.14300613835475,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,1.05505848386836,1.41106448562846,1.25666591329675,11.6181634835156,3.90418263683761,6.19227386364912,1.13236794963186,2.20841518460394,3.87900202508178,7.45567044872489,0.292780797011547,0,34.2312453979512,4.19352935770721,0,5.20987930999565,0.299581278809645,0,0,0,0,0,0.162241263067758,1.52759045775474,4.22983700074316,6.57079171927554,7.99679052368601,2.08192708740326,0.229902104433473,1.26043490863744,3.76762044589288,0.544291993210623,0.2562274405697,0.468508622798644,1.55222022443409,1.07783996466421,1.13463648100692,1.58356011747554,1.7535658594206,1.39023624612799,22.984642990463,41.9795558272205,1.39323986772945,2.80885274925294,3.3455227924913,2.27330799516474,6.00664740352955,4.92504725960302,4.32148947506436,4.7348947117042,3.14822770795846,2.31400669331067,1.62773761325285,2.68273401399619,2.45207218971056,0.658239399653922,0.985004784474571,0.486412857275134,0.584799949701329,1.3173006917463,0.402619256281115,0.210289948564127,0,78.9700891331277,33.056320832943,1.2797295032114,2.09013004674395,4.38149368495117,7.66397393568702,10.8965241483986,13.1255682017666,36.0642086773829,13.0112174231969,10.8074139784116,12.5342577385925,12.4777015756237,32.357498711552,34.5820879799511,27.2823544358483,0,1.37098215131675,3.38123207019241,3.25842124552503,3.10323979468201,3.36651935473529,4.61626721007078,4.13308414342886,8.00693511991011,6.66344685177723,2.07516838961004,3.67059232575407,3.73462090715086,3.59779379815766,5.68008339887808,6.51178331331525,3.8193877767213,4.60313819921297,9.89024883327716,0.823684239564244,8.62609239164127,5.20997326735905,4.05648975048929,2.02063102357689,2.33216637578486,4.3419916922703,9.05290631816363,2.08440552947533,2.44447464663039,2.54617628662782,3.28566347603903,4.18765643604539,5.2369600994923,3.70753930929818,2.52216230569906,2.6575762757853,1.75400245523236,6.55453258862952,6.21665934717224,5.35201516751593,1.50791283939272,0,8.35999264132362,7.45029215022778,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,3.69044221541498,0.890328018336276,1.46598263418218,2.63952196756057,5.30980553359851,5.58395463156457,3.32555912661226,3.96070667487386,2.95301892880773,8.60818414242997,9.04499026088774,5.08947221268508,5.34746067577082,2.21225730555071,5.27093042874994,4.12542172992747,9.53230896110606,2.16073312837572,1.81102157295856,1.92903331528433,3.01478397191865,3.56737635204141,3.9491764944509,3.95804433848979,5.16277757740163,8.26145076368899,3.08739757276947,19.9512366059191,59.4189090240932,24.9092379953284,22.9194900486022,17.3989353729765,21.2781010739791,0,3.75915937755276,1.857481811669,2.22233432843654,6.40452753815949,3.8274383761887,5.0331198105435,7.47905091972963,8.25713568709582,9.53579819250524,13.3653886522116,2.05618395827738,3.65975040828328,4.21220829205025,10.8725913927524,15.2853794622324,18.3415511083356,13.5551667389551,19.8934515907862,9.33227807700909,30.4456263412594,0,0.897099276263873,0.496375471371293,0.972255941720238,1.42075805825504,1.01373675294467,1.05621514781179,1.3020438484395,1.57289016638566,0.241584120826006,0.288030006257865,3.47612232690996,3.24360344464263,3.80030541509861,3.63778304337826,3.22248052201467,3.57626438606277,2.76449533895928,2.06765338044408,4.2405908978222,4.57240839929999,4.43635214602098,3.11865218367208,3.46362629905186,6.66198342434943,38.0907044473555,2.44184548711471,0.62799699626633,3.02192309455341,6.76163579112667,3.56596703357246,5.12824547948342,25.5098371104088,12.0377304968487,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0.93408612825759,1.99512436700516,1.53660245178721,1.70174701947806,1.46729213839588,3.8607136774503,2.44471400581777,5.35691148821125,3.2091920959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|phase1_expression=5.12476310735341,60.7217209292488,38.6749353481106,32.6661348211376,42.0752413154932,8.39396359559449,11.4470193891808,5.4231795845462,0.703943610758334,0.468129052643987,1.02730780935303,1.67521533890206,5.13602189793617,5.50748535239684,1.99865857089398,4.85940641735582,1.39912375625629,6.15151222448563,4.79900517620086,6.79023442876848,1.36069264241712,5.36171136484781,1.82839852397255,40.7980678123187,37.852531376083,29.860062133981,22.3996238002719,28.8731451799091,21.2826229791139,26.2111334950328,13.082100128663,5.71527606113668,7.99584223859941,0,5.77703239502549,4.3221007793208,5.3084032628216,1.67412652294763,0.7813353445238,1.57057123192139,1.17646297606203,2.04913645487534,0.485510353031154,0.503587271902309,0.811015449756117,0.734187008646726,0,0,0.219686182734472,0,0,0,2.68452169692378,2.90144856804538,6.04968838456435,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.0755715601067855,7.8263411949453,0.860423876981386,6.11974200336975,3.77792234146472,1.94932925234301,2.68816132258401,7.72444310724635,0,0,0,5.35204995151386,0,0,0,4.97929394325792,4.05375784760158,1.01104889002957,9.81981365583916,4.14300613835475,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,1.05505848386836,1.41106448562846,1.25666591329675,11.6181634835156,3.90418263683761,6.19227386364912,1.13236794963186,2.20841518460394,3.87900202508178,7.45567044872489,0.292780797011547,0,34.2312453979512,4.19352935770721,0,5.20987930999565,0.299581278809645,0,0,0,0,0,0.162241263067758,1.52759045775474,4.22983700074316,6.57079171927554,7.99679052368601,2.08192708740326,0.229902104433473,1.26043490863744,3.76762044589288,0.544291993210623,0.2562274405697,0.468508622798644,1.55222022443409,1.07783996466421,1.13463648100692,1.58356011747554,1.7535658594206,1.39023624612799,22.984642990463,41.9795558272205,1.39323986772945,2.80885274925294,3.3455227924913,2.27330799516474,6.00664740352955,4.92504725960302,4.32148947506436,4.7348947117042,3.14822770795846,2.31400669331067,1.62773761325285,2.68273401399619,2.45207218971056,0.658239399653922,0.985004784474571,0.486412857275134,0.584799949701329,1.3173006917463,0.402619256281115,0.210289948564127,0,78.9700891331277,33.056320832943,1.2797295032114,2.09013004674395,4.38149368495117,7.66397393568702,10.8965241483986,13.1255682017666,36.0642086773829,13.0112174231969,10.8074139784116,12.5342577385925,12.4777015756237,32.357498711552,34.5820879799511,27.2823544358483,0,1.37098215131675,3.38123207019241,3.25842124552503,3.10323979468201,3.36651935473529,4.61626721007078,4.13308414342886,8.00693511991011,6.66344685177723,2.07516838961004,3.67059232575407,3.73462090715086,3.59779379815766,5.68008339887808,6.51178331331525,3.8193877767213,4.60313819921297,9.89024883327716,0.823684239564244,8.62609239164127,5.20997326735905,4.05648975048929,2.02063102357689,2.33216637578486,4.3419916922703,9.05290631816363,2.08440552947533,2.44447464663039,2.54617628662782,3.28566347603903,4.18765643604539,5.2369600994923,3.70753930929818,2.52216230569906,2.6575762757853,1.75400245523236,6.55453258862952,6.21665934717224,5.35201516751593,1.50791283939272,0,8.35999264132362,7.45029215022778,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,3.69044221541498,0.890328018336276,1.46598263418218,2.63952196756057,5.30980553359851,5.58395463156457,3.32555912661226,3.96070667487386,2.95301892880773,8.60818414242997,9.04499026088774,5.08947221268508,5.34746067577082,2.21225730555071,5.27093042874994,4.12542172992747,9.53230896110606,2.16073312837572,1.81102157295856,1.92903331528433,3.01478397191865,3.56737635204141,3.9491764944509,3.95804433848979,5.16277757740163,8.26145076368899,3.08739757276947,19.9512366059191,59.4189090240932,24.9092379953284,22.9194900486022,17.3989353729765,21.2781010739791,0,3.75915937755276,1.857481811669,2.22233432843654,6.40452753815949,3.8274383761887,5.0331198105435,7.47905091972963,8.25713568709582,9.53579819250524,13.3653886522116,2.05618395827738,3.65975040828328,4.21220829205025,10.8725913927524,15.2853794622324,18.3415511083356,13.5551667389551,19.8934515907862,9.33227807700909,30.4456263412594,0,0.897099276263873,0.496375471371293,0.972255941720238,1.42075805825504,1.01373675294467,1.05621514781179,1.3020438484395,1.57289016638566,0.241584120826006,0.288030006257865,3.47612232690996,3.24360344464263,3.80030541509861,3.63778304337826,3.22248052201467,3.57626438606277,2.76449533895928,2.06765338044408,4.2405908978222,4.57240839929999,4.43635214602098,3.11865218367208,3.46362629905186,6.66198342434943,38.0907044473555,2.44184548711471,0.62799699626633,3.02192309455341,6.76163579112667,3.56596703357246,5.12824547948342,25.5098371104088,12.0377304968487,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0.93408612825759,1.99512436700516,1.53660245178721,1.70174701947806,1.46729213839588,3.8607136774503,2.44471400581777,5.35691148821125,3.2091920959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|short_description=p1@Gramd1c
|short_description=p1@Gramd1c
}}
}}

Latest revision as of 13:43, 25 September 2015

Short description:p1@Gramd1c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gramd1c_5end
Coexpression cluster:MCL_coexpression_mm9:3051
Association with transcript: 51bp_to_ENSMUST00000036174, NM_153528, uc007zgt.2_5end
EntrezGene:Gramd1c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gramd1c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I560.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I638.67
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.45
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D140.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D237.85
GP2+ M cell, pool1.CNhs13228.11845-124H929.86
GP2+ M cell, pool2.CNhs13231.11846-124I122.40
GP2+ M cell, pool3.CNhs13240.11847-124I228.87
Ileum epithelium, pool1.CNhs13199.10252-104B921.28
Ileum epithelium, pool2.CNhs13232.10253-104C126.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.82
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H734.23
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C422.98
forelimb, embryo E18.CNhs11008.1520-43B541.98
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I378.97
intestine, adult.CNhs10496.178-9A333.06
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D136.06
intestine, neonate N01.CNhs11192.1322-23E913.01
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F212.53
intestine, neonate N10.CNhs11098.755-23A512.48
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E334.58
intestine, neonate N30.CNhs11131.1384-42G127.28
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F49.89
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C319.95
skin, neonate N00.CNhs11124.650-25G459.42
skin, neonate N03.CNhs11215.662-22H324.91
skin, neonate N06.CNhs11097.693-20I522.92
skin, neonate N10.CNhs11108.762-6C417.40
small intestine, neonate N16.CNhs11114.790-21I121.28
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.54
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C615.29
stomach, neonate N03.CNhs11193.1340-24B818.34
stomach, neonate N07.CNhs11210.718-18A913.56
stomach, neonate N25.CNhs11104.1355-25E419.89
stomach, neonate N30.CNhs11134.1386-42I19.33
submandibular gland, adult.CNhs10469.59-29C130.45
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C44.24
thymus, neonate N07.CNhs11211.713-19D34.57
thymus, neonate N10.CNhs11194.748-24E44.44
thymus, neonate N20.CNhs11186.820-7A23.12
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B438.09
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D525.51
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C217.40
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.55





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.73e-17118
endoderm2.73e-17118
presumptive endoderm2.73e-17118
digestive system1.26e-16116
digestive tract1.26e-16116
primitive gut1.26e-16116
gastrointestinal system1.73e-1647
subdivision of digestive tract1.93e-15114
intestine4.35e-1431
organ component layer7.50e-0924
mucosa8.02e-0915
intestinal mucosa1.71e-0713
wall of intestine1.71e-0713
gastrointestinal system mucosa1.71e-0713
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