FFCP PHASE1:Mm9::chr16:45493044..45493061,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:45493044..45493061,- to FFCP PHASE1:Mm9::chr16:45493044..45493061,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100047671,208166 | |EntrezGene=100047671,208166 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q7TPQ6,E9Q573,D6RI44 | |UniProt=Q7TPQ6,E9Q573,D6RI44 | ||
|association_with_transcript=20bp_to_ENSMUST00000065467,ENSMUST00000114585,NM_001005854,uc007zip.1_5end | |||
|cluster_id=chr16:45493044..45493061,- | |||
|description=CAGE_peak_3_at_Gm17783_5end,CAGE_peak_3_at_Gm609_5end | |||
|id=chr16:45493044..45493061,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.72e-11,9;CL:0002251,8.72e-11,9;CL:0000066,2.82e-08,25;CL:0000682,1.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.62e-22!59;UBERON:0000160!3.64e-21!43;UBERON:0000344!1.20e-08!15;UBERON:0002108!6.73e-08!16;UBERON:0007023!4.38e-07!51;UBERON:0001242!5.99e-07!13;UBERON:0000060!5.99e-07!13;UBERON:0001262!5.99e-07!13;UBERON:0004786!5.99e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.82e-23,31;UBERON:0005409,1.57e-19,47;UBERON:0000344,1.04e-17,15;UBERON:0001242,3.80e-14,13;UBERON:0001262,3.80e-14,13;UBERON:0004786,3.80e-14,13;UBERON:0003350,8.72e-11,9;UBERON:0004808,8.72e-11,9;UBERON:0001277,8.72e-11,9;UBERON:0004923,5.52e-10,24;UBERON:0000485,1.33e-08,11;UBERON:0002108,6.51e-08,4 | |||
|phase1_expression=0,1.74487703819681,3.63999391511629,0,0,9.9048770428015,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,4.47978783821539,3.21172993494038,3.44539178469012,6.8921919385452,5.38678081714723,1.71021077510736,1.51218077855958,1.99557459589774,0,0,0,3.17736781726402,1.16364251750945,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11620568364698,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0.41889341362691,0.510914110417183,0,0,0,0.449371918214468,2.74500361691176,0,1.21677024134594,1.79000820131231,0.41557608911912,0,1.83310854930569,0.870848794270651,2.27450482590307,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0.264450566663544,0.426576501070468,1.16118335930219,1.28867461322093,1.81515172161008,1.77902435075896,1.14135375667535,0.949058123089023,1.4822905925161,1.25667604400135,0.994782360205754,1.16978452271472,0.898819408654221,1.72910439899755,2.98711909881551,0.758671603812327,1.37098215131675,0,0.814605311381257,0.387904974335251,1.26244475802573,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,6.38730383437209,0.712262414669021,3.25773918707152,14.3524006986106,2.65490276679926,0.485561272309963,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,1.42598951353889,1.58018378967908,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.328281799490123,1.45740418314925,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0.836353184057875,1.09181281873089,0.944050424693745,1.1571483801547,1.04702376793612,5.31421390496351,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,1.31377732815827,8.42497471629419,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.320125762024346,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,1.74487703819681,3.63999391511629,0,0,9.9048770428015,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,4.47978783821539,3.21172993494038,3.44539178469012,6.8921919385452,5.38678081714723,1.71021077510736,1.51218077855958,1.99557459589774,0,0,0,3.17736781726402,1.16364251750945,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11620568364698,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0.41889341362691,0.510914110417183,0,0,0,0.449371918214468,2.74500361691176,0,1.21677024134594,1.79000820131231,0.41557608911912,0,1.83310854930569,0.870848794270651,2.27450482590307,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0.264450566663544,0.426576501070468,1.16118335930219,1.28867461322093,1.81515172161008,1.77902435075896,1.14135375667535,0.949058123089023,1.4822905925161,1.25667604400135,0.994782360205754,1.16978452271472,0.898819408654221,1.72910439899755,2.98711909881551,0.758671603812327,1.37098215131675,0,0.814605311381257,0.387904974335251,1.26244475802573,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,6.38730383437209,0.712262414669021,3.25773918707152,14.3524006986106,2.65490276679926,0.485561272309963,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,1.42598951353889,1.58018378967908,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.328281799490123,1.45740418314925,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0.836353184057875,1.09181281873089,0.944050424693745,1.1571483801547,1.04702376793612,5.31421390496351,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,1.31377732815827,8.42497471629419,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.320125762024346,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p3@Gm17783,p3@Gm609 | |||
}} | }} |
Latest revision as of 14:18, 25 September 2015
Short description: | p3@Gm17783, p3@Gm609 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm17783_5end, CAGE_peak_3_at_Gm609_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENSMUST00000065467, ENSMUST00000114585, NM_001005854, uc007zip.1_5end |
EntrezGene: | 100047671,208166 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.72e-11 | 9 |
epithelial cell of alimentary canal | 8.72e-11 | 9 |
epithelial cell | 2.82e-08 | 25 |
M cell of gut | 1.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.82e-23 | 31 |
gastrointestinal system | 1.57e-19 | 47 |
mucosa | 1.04e-17 | 15 |
intestinal mucosa | 3.80e-14 | 13 |
wall of intestine | 3.80e-14 | 13 |
gastrointestinal system mucosa | 3.80e-14 | 13 |
epithelium of mucosa | 8.72e-11 | 9 |
gastrointestinal system epithelium | 8.72e-11 | 9 |
intestinal epithelium | 8.72e-11 | 9 |
organ component layer | 5.52e-10 | 24 |
simple columnar epithelium | 1.33e-08 | 11 |
small intestine | 6.51e-08 | 4 |