FFCP PHASE1:Mm9::chr5:148133963..148133986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231903 | |EntrezGene=231903 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=Q283N4,B9EK13 | |UniProt=Q283N4,B9EK13 | ||
|association_with_transcript=29bp_to_ENSMUST00000100433,NM_001039678,uc009aoa.2_5end | |association_with_transcript=29bp_to_ENSMUST00000100433,NM_001039678,uc009aoa.2_5end | ||
|cluster_id=chr5:148133963..148133986,- | |||
|description=CAGE_peak_1_at_Prhoxnb_5end | |description=CAGE_peak_1_at_Prhoxnb_5end | ||
|id=chr5:148133963..148133986,- | |id=chr5:148133963..148133986,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.38e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.70e-20!22;UBERON:0007499!7.70e-20!22;UBERON:0006925!7.70e-20!22;UBERON:0009497!7.70e-20!22;UBERON:0000015!7.70e-20!22;UBERON:0002423!7.70e-20!22;UBERON:0006235!7.70e-20!22;UBERON:0008835!7.70e-20!22;UBERON:0003894!7.70e-20!22;UBERON:0004161!7.70e-20!22;UBERON:0008836!7.70e-20!22;UBERON:0009854!1.10e-18!23;UBERON:0009856!1.10e-18!23;UBERON:0002365!1.18e-16!25;UBERON:0002330!1.18e-16!25;UBERON:0005256!1.21e-13!47;UBERON:0005172!9.58e-13!49;UBERON:0005173!9.58e-13!49;UBERON:0002417!9.58e-13!49;UBERON:0000916!9.58e-13!49;UBERON:0002368!6.51e-09!60;UBERON:0009569!4.77e-08!66;UBERON:0002530!1.24e-07!65;UBERON:0002369!3.13e-07!7;UBERON:0006858!3.13e-07!7;UBERON:0000949!9.29e-07!72 | |ontology_enrichment_uberon=UBERON:0002107!7.70e-20!22;UBERON:0007499!7.70e-20!22;UBERON:0006925!7.70e-20!22;UBERON:0009497!7.70e-20!22;UBERON:0000015!7.70e-20!22;UBERON:0002423!7.70e-20!22;UBERON:0006235!7.70e-20!22;UBERON:0008835!7.70e-20!22;UBERON:0003894!7.70e-20!22;UBERON:0004161!7.70e-20!22;UBERON:0008836!7.70e-20!22;UBERON:0009854!1.10e-18!23;UBERON:0009856!1.10e-18!23;UBERON:0002365!1.18e-16!25;UBERON:0002330!1.18e-16!25;UBERON:0005256!1.21e-13!47;UBERON:0005172!9.58e-13!49;UBERON:0005173!9.58e-13!49;UBERON:0002417!9.58e-13!49;UBERON:0000916!9.58e-13!49;UBERON:0002368!6.51e-09!60;UBERON:0009569!4.77e-08!66;UBERON:0002530!1.24e-07!65;UBERON:0002369!3.13e-07!7;UBERON:0006858!3.13e-07!7;UBERON:0000949!9.29e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.63e-27,22;UBERON:0007499,1.63e-27,22;UBERON:0006925,1.63e-27,22;UBERON:0009497,1.63e-27,22;UBERON:0000015,1.63e-27,22;UBERON:0002423,1.63e-27,22;UBERON:0006235,1.63e-27,22;UBERON:0008835,1.63e-27,22;UBERON:0003894,1.63e-27,22;UBERON:0004161,1.63e-27,22;UBERON:0008836,1.63e-27,22;UBERON:0009854,4.30e-26,23;UBERON:0009856,4.30e-26,23;UBERON:0002365,1.35e-23,25;UBERON:0002330,1.35e-23,25;UBERON:0005256,2.13e-15,45;UBERON:0005172,1.12e-13,49;UBERON:0005173,1.12e-13,49;UBERON:0002417,1.12e-13,49;UBERON:0000916,1.12e-13,49;UBERON:0003914,3.06e-10,47;UBERON:0002368,3.80e-10,60;UBERON:0003104,6.85e-10,61;UBERON:0009142,6.85e-10,61;UBERON:0002530,5.98e-09,65;UBERON:0009569,9.85e-09,66;UBERON:0003929,4.45e-08,55;UBERON:0000949,1.45e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.044160987939,119.674954732564,52.8909127805061,76.6736172588249,75.7165439194497,13.2017754923847,0,0,0,0,0,0,0,0,0,0,12.6744106488157,0,0.148442139064825,0.693941307064543,1.82679286987285,2.99800146432876,1.50722640552623,0.587943535678524,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,53.0650202485997,0.166845105716094,0,0,1.01430060694251,1.4470629585145,6.87489799809833,29.6327021574335,31.940639674682,28.2798255583724,18.6898668485561,32.7484033948283,32.7639556770289,46.4745135422686,72.1177602358087,103.242913571761,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0.655087691238533,0.674321731924103,1.65306911450672,0,0,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,1.2869045591501,2.22246727801615,0.618105171716683,1.28367683836726,1.26348605881899,0.50695859978048,1.32038438970253,1.96647165686753,1.34452820050225,1.09127391015665,0.476293691283074,1.27472758539341,1.15745532278223,1.64834360321323,1.61918812147837,2.05721551431249,0.70990322463735,0.476872379894642,1.30811774969096,1.31753132581463,1.69229215783353,1.64635175585495,1.31534855718921,0.950628796921032,1.12228454331548,1.18635018124174,1.47756723563345,1.63692417267876,0.619747364743864,1.15743966588685,0,2.33931608445408,4.51229213501426,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.044160987939,119.674954732564,52.8909127805061,76.6736172588249,75.7165439194497,13.2017754923847,0,0,0,0,0,0,0,0,0,0,12.6744106488157,0,0.148442139064825,0.693941307064543,1.82679286987285,2.99800146432876,1.50722640552623,0.587943535678524,0.502666365318702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,53.0650202485997,0.166845105716094,0,0,1.01430060694251,1.4470629585145,6.87489799809833,29.6327021574335,31.940639674682,28.2798255583724,18.6898668485561,32.7484033948283,32.7639556770289,46.4745135422686,72.1177602358087,103.242913571761,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0.655087691238533,0.674321731924103,1.65306911450672,0,0,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,1.2869045591501,2.22246727801615,0.618105171716683,1.28367683836726,1.26348605881899,0.50695859978048,1.32038438970253,1.96647165686753,1.34452820050225,1.09127391015665,0.476293691283074,1.27472758539341,1.15745532278223,1.64834360321323,1.61918812147837,2.05721551431249,0.70990322463735,0.476872379894642,1.30811774969096,1.31753132581463,1.69229215783353,1.64635175585495,1.31534855718921,0.950628796921032,1.12228454331548,1.18635018124174,1.47756723563345,1.63692417267876,0.619747364743864,1.15743966588685,0,2.33931608445408,4.51229213501426,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@Prhoxnb | |short_description=p1@Prhoxnb | ||
}} | }} |
Latest revision as of 18:06, 25 September 2015
Short description: | p1@Prhoxnb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prhoxnb_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 29bp_to_ENSMUST00000100433, NM_001039678, uc009aoa.2_5end |
EntrezGene: | Prhoxnb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.63e-27 | 22 |
epithelial sac | 1.63e-27 | 22 |
digestive gland | 1.63e-27 | 22 |
epithelium of foregut-midgut junction | 1.63e-27 | 22 |
anatomical boundary | 1.63e-27 | 22 |
hepatobiliary system | 1.63e-27 | 22 |
foregut-midgut junction | 1.63e-27 | 22 |
hepatic diverticulum | 1.63e-27 | 22 |
liver primordium | 1.63e-27 | 22 |
septum transversum | 1.63e-27 | 22 |
liver bud | 1.63e-27 | 22 |
digestive tract diverticulum | 4.30e-26 | 23 |
sac | 4.30e-26 | 23 |
exocrine gland | 1.35e-23 | 25 |
exocrine system | 1.35e-23 | 25 |
trunk mesenchyme | 2.13e-15 | 45 |
abdomen element | 1.12e-13 | 49 |
abdominal segment element | 1.12e-13 | 49 |
abdominal segment of trunk | 1.12e-13 | 49 |
abdomen | 1.12e-13 | 49 |
epithelial tube | 3.06e-10 | 47 |
endocrine gland | 3.80e-10 | 60 |
mesenchyme | 6.85e-10 | 61 |
entire embryonic mesenchyme | 6.85e-10 | 61 |
gland | 5.98e-09 | 65 |
subdivision of trunk | 9.85e-09 | 66 |
gut epithelium | 4.45e-08 | 55 |
endocrine system | 1.45e-07 | 72 |