FFCP PHASE1:Mm9::chr19:4232435..4232479,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:4232435..4232479,+ to FFCP PHASE1:Mm9::chr19:4232435..4232479,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69745 | |EntrezGene=69745 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc008fzn.2_5end | |||
|cluster_id=chr19:4232435..4232479,+ | |||
|description=CAGE_peak_5_at_Pold4_5end | |||
|id=chr19:4232435..4232479,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.59e-08!66;CL:0000144!2.36e-07!121;CL:0000012!2.36e-07!121;CL:0000219!9.03e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.16e-11,54;CL:0000473,2.54e-09,7;CL:0000333,3.24e-09,10;CL:0000095,3.24e-09,10;CL:0000243,3.24e-09,10;CL:0000123,3.24e-09,10;CL:0000125,3.24e-09,10;CL:0000030,3.24e-09,10;CL:0000339,3.24e-09,10;CL:0000066,9.51e-08,25;CL:0002320,6.49e-07,46;CL:0000134,6.49e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.86e-08!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.49e-07,46;UBERON:0002371,6.98e-07,16;UBERON:0000344,8.29e-07,15;UBERON:0002204,8.59e-07,32 | |||
|phase1_expression=0.320297694209588,4.88565570695105,1.36499771816861,1.20985684522732,0.500895729946347,0.671517087647559,1.16806320297763,0.129123323441576,0.281577444303333,0,0,0,0.171200729931206,0.262261207256992,0.333109761815663,0.404950534779652,0,1.41957974411207,1.64537320326887,1.69755860719212,0.255129870453209,0.496454756004426,0.522399578277871,5.91971964335605,5.50582274561208,2.8711598205751,3.4460959692726,5.17130958446134,2.47030445293286,1.26015064879965,4.6563407237614,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,1.6366586336825,1.21652317463417,0.917733760808408,1.56478268869608,0.65407546914134,1.31811709640683,1.36100929351998,1.53985063787899,2.87505128729943,1.17447824240415,0,0,3.08711323243136,0.85960031981627,0.515672092277442,0.202316460859598,0,0,1.35537812827653,1.77858959222228,10.3488467487361,15.8218618010716,16.3410426437603,1.49800055259202,1.92109152660777,0,0,0,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,16.5083101466341,7.63272757078534,0.289864488701678,1.72084775396277,12.2394840067395,0,0,1.79210754838934,0.702222100658759,18.9177658061644,28.3166745017127,19.7870161725791,0,1.28326477414318,0,14.2213340630666,4.5463118612355,7.09407623330276,8.59391556525132,0.79928715803342,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.494389935468748,0.578397427679647,2.65383165584962,0.647067399789637,0.883366073841574,0.484875253135222,1.86391761218122,0,0,2.29911349687732,0.359445373517761,0.599902730993408,1.01656181658452,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.622034853050465,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.65209391491899,2.90895623329899,0,0,0,0,0.22237804384487,0.380451252225118,1.89811624617805,1.81168850196412,0.502670417600539,0.596869416123452,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.972811360650212,2.19649130550465,2.87536413054709,2.97712758134803,5.92871578917665,3.03094653536534,1.25578189465339,1.92977408545347,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.81931657357869,0.172684981865896,0,3.01582567878545,2.71952841909355,0,0.275936746304732,0,0,0.655739781506702,1.51482556322624,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.534196811001766,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0,0,0,0.164549020602121,0,0.704015124191131,0.42366414172764,0.661585194164886,1.48397627647332,0.161464426695906,0.301564624640779,0.358117032009409,0.492422699235184,1.45740418314925,0.370850604021019,0.170870880797853,0,0,0,0,0.228778173206523,1.86976272993241,1.39951452323658,0.967399816630967,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.495920734352016,0.523511883968059,0.518459893167171,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,2.0405734525369,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,1.31377732815827,0.36630324853453,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.468207537349412,0.320125762024346,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0,0.282328141245992,0.423073039458382,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.57386499620653,0.882365676478062,1.62307484934295 | |phase1_expression=0.320297694209588,4.88565570695105,1.36499771816861,1.20985684522732,0.500895729946347,0.671517087647559,1.16806320297763,0.129123323441576,0.281577444303333,0,0,0,0.171200729931206,0.262261207256992,0.333109761815663,0.404950534779652,0,1.41957974411207,1.64537320326887,1.69755860719212,0.255129870453209,0.496454756004426,0.522399578277871,5.91971964335605,5.50582274561208,2.8711598205751,3.4460959692726,5.17130958446134,2.47030445293286,1.26015064879965,4.6563407237614,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,1.6366586336825,1.21652317463417,0.917733760808408,1.56478268869608,0.65407546914134,1.31811709640683,1.36100929351998,1.53985063787899,2.87505128729943,1.17447824240415,0,0,3.08711323243136,0.85960031981627,0.515672092277442,0.202316460859598,0,0,1.35537812827653,1.77858959222228,10.3488467487361,15.8218618010716,16.3410426437603,1.49800055259202,1.92109152660777,0,0,0,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,16.5083101466341,7.63272757078534,0.289864488701678,1.72084775396277,12.2394840067395,0,0,1.79210754838934,0.702222100658759,18.9177658061644,28.3166745017127,19.7870161725791,0,1.28326477414318,0,14.2213340630666,4.5463118612355,7.09407623330276,8.59391556525132,0.79928715803342,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.494389935468748,0.578397427679647,2.65383165584962,0.647067399789637,0.883366073841574,0.484875253135222,1.86391761218122,0,0,2.29911349687732,0.359445373517761,0.599902730993408,1.01656181658452,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.622034853050465,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.65209391491899,2.90895623329899,0,0,0,0,0.22237804384487,0.380451252225118,1.89811624617805,1.81168850196412,0.502670417600539,0.596869416123452,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.972811360650212,2.19649130550465,2.87536413054709,2.97712758134803,5.92871578917665,3.03094653536534,1.25578189465339,1.92977408545347,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.81931657357869,0.172684981865896,0,3.01582567878545,2.71952841909355,0,0.275936746304732,0,0,0.655739781506702,1.51482556322624,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.534196811001766,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0,0,0,0.164549020602121,0,0.704015124191131,0.42366414172764,0.661585194164886,1.48397627647332,0.161464426695906,0.301564624640779,0.358117032009409,0.492422699235184,1.45740418314925,0.370850604021019,0.170870880797853,0,0,0,0,0.228778173206523,1.86976272993241,1.39951452323658,0.967399816630967,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.495920734352016,0.523511883968059,0.518459893167171,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,2.0405734525369,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,1.31377732815827,0.36630324853453,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.468207537349412,0.320125762024346,0.0574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0,0.282328141245992,0.423073039458382,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.57386499620653,0.882365676478062,1.62307484934295 | ||
|short_description=p5@Pold4 | |||
}} | }} |
Latest revision as of 19:12, 25 September 2015
Short description: | p5@Pold4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pold4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc008fzn.2_5end |
EntrezGene: | Pold4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.16e-11 | 54 |
defensive cell | 2.54e-09 | 7 |
migratory neural crest cell | 3.24e-09 | 10 |
neuron associated cell | 3.24e-09 | 10 |
glial cell (sensu Vertebrata) | 3.24e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.24e-09 | 10 |
glial cell | 3.24e-09 | 10 |
glioblast | 3.24e-09 | 10 |
glioblast (sensu Vertebrata) | 3.24e-09 | 10 |
epithelial cell | 9.51e-08 | 25 |
connective tissue cell | 6.49e-07 | 46 |
mesenchymal cell | 6.49e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.49e-07 | 46 |
bone marrow | 6.98e-07 | 16 |
mucosa | 8.29e-07 | 15 |
musculoskeletal system | 8.59e-07 | 32 |