FFCP PHASE1:Mm9::chr10:128346460..128346485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100505035,12512 | |EntrezGene=100505035,12512 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=P41731,Q549D0 | |UniProt=P41731,Q549D0 | ||
|association_with_transcript=-436bp_to_ENSMUST00000026407,NM_007653,uc007hov.1_5end | |association_with_transcript=-436bp_to_ENSMUST00000026407,NM_007653,uc007hov.1_5end | ||
|cluster_id=chr10:128346460..128346485,+ | |||
|description=CAGE_peak_8_at_Cd63_5end,CAGE_peak_8_at_LOC100505035_5end | |description=CAGE_peak_8_at_Cd63_5end,CAGE_peak_8_at_LOC100505035_5end | ||
|id=chr10:128346460..128346485,+ | |id=chr10:128346460..128346485,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.35e-23,3;CL:0000239,3.78e-20,6;CL:0000677,3.78e-20,6;CL:0000584,3.78e-20,6;CL:0000075,2.51e-17,7;CL:0000066,2.93e-14,25;CL:0002563,1.49e-13,9;CL:0002251,1.49e-13,9;CL:0000473,2.62e-10,7;CL:0002076,3.07e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.17e-23,15;UBERON:0002465,6.97e-22,3;UBERON:0001962,3.12e-15,2;UBERON:0001961,3.12e-15,2;UBERON:0001744,3.12e-15,2;UBERON:0004923,1.17e-14,24;UBERON:0001242,2.02e-14,13;UBERON:0001262,2.02e-14,13;UBERON:0004786,2.02e-14,13;UBERON:0003350,1.49e-13,9;UBERON:0004808,1.49e-13,9;UBERON:0001277,1.49e-13,9;UBERON:0000485,3.83e-11,11;UBERON:0003199,1.74e-08,1;UBERON:0000029,2.44e-08,1;UBERON:0001097,2.44e-08,1;UBERON:0003968,2.44e-08,1;UBERON:0001467,2.44e-08,1 | |||
|phase1_expression=0.160148847104794,10.4692622291808,14.1049764210756,0,0,7.21880869221126,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,5.43974237497583,6.19405058881359,10.9104073181854,11.1998119001359,10.1271479362368,0.190023419456374,0,11.0865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.469428954583016,0,0.104859344425711,0,0,0,0,0.102710957164827,0.389762468933385,0.358053391334963,0.596044064343795,0.120195449519969,0.443068581523732,0.100966449948148,0.304827226619999,0,0.292373642219257,0.384847366561318,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,10.4692622291808,14.1049764210756,0,0,7.21880869221126,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,5.43974237497583,6.19405058881359,10.9104073181854,11.1998119001359,10.1271479362368,0.190023419456374,0,11.0865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.469428954583016,0,0.104859344425711,0,0,0,0,0.102710957164827,0.389762468933385,0.358053391334963,0.596044064343795,0.120195449519969,0.443068581523732,0.100966449948148,0.304827226619999,0,0.292373642219257,0.384847366561318,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p8@Cd63,p8@LOC100505035 | |short_description=p8@Cd63,p8@LOC100505035 | ||
}} | }} |
Latest revision as of 19:30, 25 September 2015
Short description: | p8@Cd63, p8@LOC100505035 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cd63_5end, CAGE_peak_8_at_LOC100505035_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -436bp_to_ENSMUST00000026407, NM_007653, uc007hov.1_5end |
EntrezGene: | 100505035,12512 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.35e-23 | 3 |
brush border epithelial cell | 3.78e-20 | 6 |
gut absorptive cell | 3.78e-20 | 6 |
enterocyte | 3.78e-20 | 6 |
columnar/cuboidal epithelial cell | 2.51e-17 | 7 |
epithelial cell | 2.93e-14 | 25 |
intestinal epithelial cell | 1.49e-13 | 9 |
epithelial cell of alimentary canal | 1.49e-13 | 9 |
defensive cell | 2.62e-10 | 7 |
endo-epithelial cell | 3.07e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.17e-23 | 15 |
lymphoid system | 6.97e-22 | 3 |
gut-associated lymphoid tissue | 3.12e-15 | 2 |
mucosa-associated lymphoid tissue | 3.12e-15 | 2 |
lymphoid tissue | 3.12e-15 | 2 |
organ component layer | 1.17e-14 | 24 |
intestinal mucosa | 2.02e-14 | 13 |
wall of intestine | 2.02e-14 | 13 |
gastrointestinal system mucosa | 2.02e-14 | 13 |
epithelium of mucosa | 1.49e-13 | 9 |
gastrointestinal system epithelium | 1.49e-13 | 9 |
intestinal epithelium | 1.49e-13 | 9 |
simple columnar epithelium | 3.83e-11 | 11 |
egg chamber | 1.74e-08 | 1 |
lymph node | 2.44e-08 | 1 |
axillary lymph node | 2.44e-08 | 1 |
peripheral lymph node | 2.44e-08 | 1 |
shoulder | 2.44e-08 | 1 |