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FFCP PHASE1:Mm9::chr3:89222578..89222597,+: Difference between revisions

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{{FFCP|EntrezGene=20416|HGNC=|MCL_coexpression_id=3428|UniProt=P98083|association_with_transcript=42bp_to_ENSMUST00000107417_5end|description=CAGE_peak_2_at_Shc1_5end|id=chr3:89222578..89222597,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.16e-12!130;UBERON:0000925!6.16e-12!130;UBERON:0006595!6.16e-12!130;UBERON:0001007!7.29e-12!128;UBERON:0001555!7.29e-12!128;UBERON:0007026!7.29e-12!128;UBERON:0000160!9.20e-12!43;UBERON:0004921!1.43e-11!126;UBERON:0004185!1.43e-11!126;UBERON:0005409!4.19e-11!59;UBERON:0005256!4.76e-08!47;UBERON:0002100!2.00e-07!98;UBERON:0009569!6.86e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.71e-11,31;UBERON:0002100,7.75e-11,90;UBERON:0004119,2.26e-10,118;UBERON:0000925,2.26e-10,118;UBERON:0006595,2.26e-10,118;UBERON:0001007,2.59e-10,116;UBERON:0001555,2.59e-10,116;UBERON:0007026,2.59e-10,116;UBERON:0005409,4.28e-10,47;UBERON:0004921,4.83e-10,114;UBERON:0005256,3.43e-09,45;UBERON:0005177,2.64e-08,79;UBERON:0003104,2.88e-07,61;UBERON:0009142,2.88e-07,61;UBERON:0009569,7.50e-07,66|phase1_expression=1.76163731815273,13.2610654902957,9.55498402718026,7.25914107136392,7.51343594919521,6.21153306073992,5.37309073369709,3.48632973292256,6.47628121897667,4.44722600011788,1.19852577757853,1.7549874978974,2.73921167889929,3.2345548895029,1.33243904726265,3.23960427823721,2.79824751251259,2.68142840554502,2.74228867211478,0.84877930359606,1.61582251287033,2.08510997521859,2.08959831311148,6.71968175732308,3.89995777814189,6.89078356938024,6.03066794622705,5.60225204983311,8.17100703662408,7.05684363327806,6.87364583031445,1.27006134691926,1.84519436275371,0,8.08784535303569,5.81821258754723,5.9209113316087,16.3227335987394,8.5946887897618,10.9939986234498,15.2940186888064,10.9287277593351,13.1087795318411,10.5753327099485,10.239070053171,8.44315059943735,16.4302182313088,1.30815093828268,2.41654801007919,1.36100929351998,4.19959264876088,1.43752564364972,3.02008690903925,3.62681071005672,3.6970317905671,3.60163210450326,3.15186783932632,4.64104883049698,0,0,0.633831403506179,7.79342423759004,6.22506357277798,4.04954872776629,0.988866362566974,4.9733608046227,4.79360176829448,2.68952813725088,0.518448061542388,0.405017814995072,1.05162480675691,0.571301968807607,1.10434270475807,0.122490799214954,0.383381884072945,0,2.20231761998777,1.14918604276669,0.46081959976873,0.527545150920775,0.457438218012048,1.04182674111352,0.558365998002762,1.12552522006336,0.916789486660861,1.17851434189467,0,0.372798891650601,4.01348824665875,2.94729084416464,11.8844440367688,5.16254326188832,10.1995700056163,7.55584468292944,3.24888208723835,5.37632264516803,3.93244376368905,6.47635225796619,4.1565760736459,5.65343319216544,0.845060518660083,7.69958864485907,5.09610479413291,7.11066703153331,4.11332977921307,4.05375784760158,4.04419556011827,4.22480354960522,4.91981978929626,5.93768556259299,3.99016251562112,0.913396434936424,4.61230994512117,3.91878865436819,7.52567725668511,5.6549966098354,10.1349936771093,6.07317299063629,1.76922110389975,5.50007289821191,5.07935492458905,2.90925151881133,1.86391761218122,0.292780797011547,1.8850203613211,8.43008282188352,5.39168060276641,4.79922184794726,5.84523044536098,0.748953197024114,0.457500602818626,0,0.869121600961382,1.27857728665165,0.83115217823824,0.973447578406546,11.4060087512354,5.22509276562391,5.30717792710717,6.73413938836717,2.47228841629137,1.37941262660084,1.98068342785884,2.10986744970001,2.58538696775046,2.562274405697,2.24884138943349,2.58703370739016,3.88022387279116,3.21480336285293,4.92663147659057,5.2606975782618,4.17070873838397,3.48252166522167,5.35033554660653,2.9855140022774,4.91549231119264,4.88961023517959,5.68326998791185,2.89976081549703,3.28336483973535,2.88099298337624,3.78791576936336,1.96764231747404,3.85667782218446,3.0229412817553,2.95100741539581,5.02090972178829,4.11399624783701,3.77585167381919,3.4859588104718,3.07019973593198,3.29325172936576,3.08674763148855,1.47202963994889,1.3377599609307,5.94753809370836,7.1401652999157,4.05247676016945,3.48355007790658,3.8660238396628,6.05050573870028,9.11749979763968,8.56015317506516,10.4396393539793,10.7054320570607,15.3314477368164,11.7384318504279,12.0877734013854,13.4822911298133,8.21324589523838,7.76650965692032,3.60369011810855,2.74196430263349,2.25415471346161,5.29493452397817,3.68509725618489,6.52263124979963,4.7427402843193,4.72352473534727,3.767969468193,5.30607804863742,6.52195779591728,3.33690211432188,3.34150291692445,4.27238013531222,4.05720242777006,5.788251834058,5.85639459097266,5.17853047411459,6.80967952455149,7.4131581560782,5.75072826109418,6.32639611036456,7.80094182786401,7.57736633841335,9.50806291666135,8.20153986317724,5.54259570499814,3.60033682363921,2.28150967018836,3.05541154395339,4.69380496577004,5.3602002381381,6.66522194480839,8.58588050574315,5.99013547603526,8.19419351700467,6.218735977642,5.57135270033509,3.453699637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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20416
|HGNC=
|MCL_coexpression_id=3428
|TSSclassifier=NA
|UniProt=P98083
|association_with_transcript=42bp_to_ENSMUST00000107417_5end
|cluster_id=chr3:89222578..89222597,+
|description=CAGE_peak_2_at_Shc1_5end
|id=chr3:89222578..89222597,+
|ontology_enrichment_celltype=
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|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.71e-11,31;UBERON:0002100,7.75e-11,90;UBERON:0004119,2.26e-10,118;UBERON:0000925,2.26e-10,118;UBERON:0006595,2.26e-10,118;UBERON:0001007,2.59e-10,116;UBERON:0001555,2.59e-10,116;UBERON:0007026,2.59e-10,116;UBERON:0005409,4.28e-10,47;UBERON:0004921,4.83e-10,114;UBERON:0005256,3.43e-09,45;UBERON:0005177,2.64e-08,79;UBERON:0003104,2.88e-07,61;UBERON:0009142,2.88e-07,61;UBERON:0009569,7.50e-07,66
|phase1_expression=1.76163731815273,13.2610654902957,9.55498402718026,7.25914107136392,7.51343594919521,6.21153306073992,5.37309073369709,3.48632973292256,6.47628121897667,4.44722600011788,1.19852577757853,1.7549874978974,2.73921167889929,3.2345548895029,1.33243904726265,3.23960427823721,2.79824751251259,2.68142840554502,2.74228867211478,0.84877930359606,1.61582251287033,2.08510997521859,2.08959831311148,6.71968175732308,3.89995777814189,6.89078356938024,6.03066794622705,5.60225204983311,8.17100703662408,7.05684363327806,6.87364583031445,1.27006134691926,1.84519436275371,0,8.08784535303569,5.81821258754723,5.9209113316087,16.3227335987394,8.5946887897618,10.9939986234498,15.2940186888064,10.9287277593351,13.1087795318411,10.5753327099485,10.239070053171,8.44315059943735,16.4302182313088,1.30815093828268,2.41654801007919,1.36100929351998,4.19959264876088,1.43752564364972,3.02008690903925,3.62681071005672,3.6970317905671,3.60163210450326,3.15186783932632,4.64104883049698,0,0,0.633831403506179,7.79342423759004,6.22506357277798,4.04954872776629,0.988866362566974,4.9733608046227,4.79360176829448,2.68952813725088,0.518448061542388,0.405017814995072,1.05162480675691,0.571301968807607,1.10434270475807,0.122490799214954,0.383381884072945,0,2.20231761998777,1.14918604276669,0.46081959976873,0.527545150920775,0.457438218012048,1.04182674111352,0.558365998002762,1.12552522006336,0.916789486660861,1.17851434189467,0,0.372798891650601,4.01348824665875,2.94729084416464,11.8844440367688,5.16254326188832,10.1995700056163,7.55584468292944,3.24888208723835,5.37632264516803,3.93244376368905,6.47635225796619,4.1565760736459,5.65343319216544,0.845060518660083,7.69958864485907,5.09610479413291,7.11066703153331,4.11332977921307,4.05375784760158,4.04419556011827,4.22480354960522,4.91981978929626,5.93768556259299,3.99016251562112,0.913396434936424,4.61230994512117,3.91878865436819,7.52567725668511,5.6549966098354,10.1349936771093,6.07317299063629,1.76922110389975,5.50007289821191,5.07935492458905,2.90925151881133,1.86391761218122,0.292780797011547,1.8850203613211,8.43008282188352,5.39168060276641,4.79922184794726,5.84523044536098,0.748953197024114,0.457500602818626,0,0.869121600961382,1.27857728665165,0.83115217823824,0.973447578406546,11.4060087512354,5.22509276562391,5.30717792710717,6.73413938836717,2.47228841629137,1.37941262660084,1.98068342785884,2.10986744970001,2.58538696775046,2.562274405697,2.24884138943349,2.58703370739016,3.88022387279116,3.21480336285293,4.92663147659057,5.2606975782618,4.17070873838397,3.48252166522167,5.35033554660653,2.9855140022774,4.91549231119264,4.88961023517959,5.68326998791185,2.89976081549703,3.28336483973535,2.88099298337624,3.78791576936336,1.96764231747404,3.85667782218446,3.0229412817553,2.95100741539581,5.02090972178829,4.11399624783701,3.77585167381919,3.4859588104718,3.07019973593198,3.29325172936576,3.08674763148855,1.47202963994889,1.3377599609307,5.94753809370836,7.1401652999157,4.05247676016945,3.48355007790658,3.8660238396628,6.05050573870028,9.11749979763968,8.56015317506516,10.4396393539793,10.7054320570607,15.3314477368164,11.7384318504279,12.0877734013854,13.4822911298133,8.21324589523838,7.76650965692032,3.60369011810855,2.74196430263349,2.25415471346161,5.29493452397817,3.68509725618489,6.52263124979963,4.7427402843193,4.72352473534727,3.767969468193,5.30607804863742,6.52195779591728,3.33690211432188,3.34150291692445,4.27238013531222,4.05720242777006,5.788251834058,5.85639459097266,5.17853047411459,6.80967952455149,7.4131581560782,5.75072826109418,6.32639611036456,7.80094182786401,7.57736633841335,9.50806291666135,8.20153986317724,5.54259570499814,3.60033682363921,2.28150967018836,3.05541154395339,4.69380496577004,5.3602002381381,6.66522194480839,8.58588050574315,5.99013547603526,8.19419351700467,6.218735977642,5.57135270033509,3.45369963731791,7.37710198765709,1.50791283939272,3.80733978673097,2.45882136509518,4.41498794087572,1.12385412991454,1.17211686592203,9.01642199571715,3.28212205365685,0.94652465824877,1.56175497718655,0.646270193198397,2.15071918157297,1.11399337041197,1.41538265394416,2.02405350837447,2.63030272120181,1.58115111178609,0.642642632843614,3.97432238583152,6.05423052468668,11.2392001953967,2.96946221350564,3.98235415019888,1.94224508923985,3.02323556964751,5.28094223316515,6.79194353625777,5.84126781093462,7.49442050187841,7.27067458955011,7.12994756769443,4.74055136903724,4.21674434299995,5.15677716240934,4.42571487479924,0.900305470156551,2.45781499187234,3.21505552547388,3.54680467284547,3.38900753443934,2.96188237083818,6.39376393140658,4.69343416127421,3.81297727554876,4.85162475720916,4.78170133530292,6.78150592122803,7.05661221659424,5.96861720015682,5.41664969158702,10.2018292820448,3.15223013417866,2.22132145037209,4.33412422722767,3.70389054739423,4.1441060541032,3.69074414846768,3.20289442489132,10.3686842296252,11.056164733569,8.29199842826543,4.77335309007557,2.37251995185852,3.86306987541013,5.50827238191186,4.39085421630384,4.36725127492355,7.01294601201068,9.6704543198643,3.40282724579238,8.03612834409116,1.24267862617385,0,2.69129782879162,2.97825282822776,4.66682852025714,3.48731523389874,2.87225413334323,5.75050469364194,3.51551839078665,2.09718688851422,0.966336483304024,0.576060012515731,0.632022241256357,3.64905387522296,2.36235201479103,1.03936658382236,2.32734704367726,0.39736270956253,2.64429988943931,1.18151621739662,2.01932899896295,2.51482461961499,2.62148081355785,1.36441033035653,1.05833025804362,1.5193997283604,1.58711268530648,0.665957860122194,2.24284641523689,1.67884616364078,6.18206700903009,4.87974436173073,4.2124873581471,4.07299920250225,7.52358156053045,0.564751842617067,0,0,0.343706364687375,0,1.5107877947794,0,0.45032120322422,0,0,2.28332164685189,2.39414924040619,4.26834014385335,4.37592090722929,3.5634237646757,4.77993121970037,2.44471400581777,4.32673620201678,2.24643446714271,3.03236654116557,4.05566879824384,4.33840585187975,3.93294331373506,3.39333307745807,4.36509564062661,2.85776214769844,3.36064545240081,5.01563973205633,0.412085900803307,3.23837624295674,2.74295401908332,4.2594193478241,2.62279808942053,2.32554266611726,2.63506265162926,3.21535509988371,2.74391959309159,4.47218509444333,3.53090695999241,3.92799590160417,4.86403574309114,3.74317033027141,5.32000356120596,3.25367366490529,4.24394544158511,3.49734809113124,7.95367468714389,8.37997110788363,10.7121465958552,7.50010825006353,4.17362104116759
|short_description=p2@Shc1
}}

Latest revision as of 20:39, 25 September 2015

Short description:p2@Shc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shc1_5end
Coexpression cluster:MCL_coexpression_mm9:3428
Association with transcript: 42bp_to_ENSMUST00000107417_5end
EntrezGene:Shc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D94.01
Mouse Schwann, donor2.CNhs12573.11746-123F92.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C17.53
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.85
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E910.71
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F211.74
intestine, neonate N10.CNhs11098.755-23A512.09
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E38.21
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D54.74
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H19.51
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A38.19
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I411.24
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H37.06
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B87.01
stomach, neonate N07.CNhs11210.718-18A99.67
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B75.75
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B44.17





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.71e-1131
trunk7.75e-1190
endoderm-derived structure2.26e-10118
endoderm2.26e-10118
presumptive endoderm2.26e-10118
digestive system2.59e-10116
digestive tract2.59e-10116
primitive gut2.59e-10116
gastrointestinal system4.28e-1047
subdivision of digestive tract4.83e-10114
trunk mesenchyme3.43e-0945
trunk region element2.64e-0879
mesenchyme2.88e-0761
entire embryonic mesenchyme2.88e-0761
subdivision of trunk7.50e-0766
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