FFCP PHASE1:Mm9::chr2:14684773..14684785,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12296 | |EntrezGene=12296 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |MCL_coexpression_id=16 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENSMUST00000137746_5end | |association_with_transcript=17bp_to_ENSMUST00000137746_5end | ||
|cluster_id=chr2:14684773..14684785,+ | |||
|description=CAGE_peak_10_at_Cacnb2_5end | |description=CAGE_peak_10_at_Cacnb2_5end | ||
|id=chr2:14684773..14684785,+ | |id=chr2:14684773..14684785,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.93e-22!9;UBERON:0000019!2.93e-22!9;UBERON:0000047!2.93e-22!9;UBERON:0004088!2.93e-22!9;UBERON:0002104!2.93e-22!9;UBERON:0001456!2.93e-22!9;UBERON:0003072!2.93e-22!9;UBERON:0003071!2.93e-22!9;UBERON:0004128!2.93e-22!9;UBERON:0001444!5.85e-18!11;UBERON:0000020!2.40e-16!12;UBERON:0001032!2.40e-16!12;UBERON:0004456!2.40e-16!12;UBERON:0005085!5.57e-15!13;UBERON:0003056!1.69e-09!49;UBERON:0000007!9.79e-09!8;UBERON:0003296!9.79e-09!8;UBERON:0010133!9.79e-09!8;UBERON:0001894!6.24e-07!10;UBERON:0006222!6.24e-07!10;UBERON:0000033!9.71e-07!63 | |ontology_enrichment_uberon=UBERON:0000970!2.93e-22!9;UBERON:0000019!2.93e-22!9;UBERON:0000047!2.93e-22!9;UBERON:0004088!2.93e-22!9;UBERON:0002104!2.93e-22!9;UBERON:0001456!2.93e-22!9;UBERON:0003072!2.93e-22!9;UBERON:0003071!2.93e-22!9;UBERON:0004128!2.93e-22!9;UBERON:0001444!5.85e-18!11;UBERON:0000020!2.40e-16!12;UBERON:0001032!2.40e-16!12;UBERON:0004456!2.40e-16!12;UBERON:0005085!5.57e-15!13;UBERON:0003056!1.69e-09!49;UBERON:0000007!9.79e-09!8;UBERON:0003296!9.79e-09!8;UBERON:0010133!9.79e-09!8;UBERON:0001894!6.24e-07!10;UBERON:0006222!6.24e-07!10;UBERON:0000033!9.71e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.70e-67,9;UBERON:0000019,1.70e-67,9;UBERON:0000047,1.70e-67,9;UBERON:0010312,1.70e-67,9;UBERON:0004088,1.70e-67,9;UBERON:0002104,1.70e-67,9;UBERON:0001456,1.70e-67,9;UBERON:0003072,1.70e-67,9;UBERON:0004128,1.70e-67,9;UBERON:0003071,1.70e-67,9;UBERON:0001444,2.49e-55,11;UBERON:0000020,9.17e-51,12;UBERON:0001032,9.17e-51,12;UBERON:0004456,9.17e-51,12;UBERON:0000033,6.71e-47,13;UBERON:0005085,6.71e-47,13;UBERON:0007811,3.54e-17,36;UBERON:0000153,2.01e-14,43;UBERON:0003056,1.11e-12,49;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5678831211281,0.780722657776222,0,1.26043490863744,1.20563854268572,2.4493139694478,3.71529788826064,2.71735001223214,64.1584359432759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5678831211281,0.780722657776222,0,1.26043490863744,1.20563854268572,2.4493139694478,3.71529788826064,2.71735001223214,64.1584359432759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@Cacnb2 | |short_description=p10@Cacnb2 | ||
}} | }} |
Latest revision as of 20:48, 25 September 2015
Short description: | p10@Cacnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Cacnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 17bp_to_ENSMUST00000137746_5end |
EntrezGene: | Cacnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.70e-67 | 9 |
camera-type eye | 1.70e-67 | 9 |
simple eye | 1.70e-67 | 9 |
immature eye | 1.70e-67 | 9 |
ocular region | 1.70e-67 | 9 |
visual system | 1.70e-67 | 9 |
face | 1.70e-67 | 9 |
optic cup | 1.70e-67 | 9 |
optic vesicle | 1.70e-67 | 9 |
eye primordium | 1.70e-67 | 9 |
subdivision of head | 2.49e-55 | 11 |
sense organ | 9.17e-51 | 12 |
sensory system | 9.17e-51 | 12 |
entire sense organ system | 9.17e-51 | 12 |
head | 6.71e-47 | 13 |
ectodermal placode | 6.71e-47 | 13 |
craniocervical region | 3.54e-17 | 36 |
anterior region of body | 2.01e-14 | 43 |
pre-chordal neural plate | 1.11e-12 | 49 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |