FFCP PHASE1:Mm9::chr8:86545343..86545374,+: Difference between revisions
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{{FFCP|EntrezGene=74337|HGNC=|MCL_coexpression_id=173|UniProt=A2TJV2|association_with_transcript=0bp_to_ENSMUST00000055077,ENSMUST00000142367,NM_028877,uc009mlq.1,uc012ggy.1_5end|description=CAGE_peak_1_at_Palm3_5end|id=chr8:86545343..86545374,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.56e-07!14;UBERON:0003918!2.56e-07!14;UBERON:0005095!2.56e-07!14;UBERON:0007687!2.56e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0006554,2.62e-11,18;UBERON:0002113,5.27e-11,14;UBERON:0003918,5.27e-11,14;UBERON:0011143,5.27e-11,14;UBERON:0005095,5.27e-11,14;UBERON:0007687,5.27e-11,14;UBERON:0001008,1.70e-10,19|phase1_expression=10.7299727560212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,4.64783285263046,0,0,0,0,0.506719730950197,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,1.15307748628029,0,0.117588707135705,0.125666591329675,3.70792451601561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.248813941220186,0,0,1.82168620147785,0.229902104433473,0.360124259610698,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,2.37124792226126,1.32374256117473,2.28736461413134,1.09597866213787,1.94633074457919,0.696504333044333,2.26360350048738,3.78165106955137,0,0,0,1.24275463521301,0.703578179943289,0,0.710234206755631,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,10.4511242762265,13.9342003116263,10.9537342123779,4.23535401709019,1.77902435075896,0.951128130562796,0,0,0.251335208800269,0,0,0,0,0,6.2590407314517,11.3106027483632,18.0332377076929,20.1614814566861,18.0375813065892,13.6764848786121,13.7223285559638,8.41377843483732,10.9899109488962,9.13139013021324,0,0.500535317148282,0.589676985339609,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.89491411770485,4.07412441105065,3.05541154395339,5.63256595892405,5.3602002381381,1.42826184531608,0.780534591431195,0.630540576424764,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78065603667255,1.79175655288934,0.164970122972535,1.32745138339963,1.69946445308487,1.81394134178851,0.377210159511796,0.885905678642318,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0,3.06103859853227,2.19909762430683,0.428674070063185,0.354680467284547,0.356737635204141,0.658196082408484,0,7.74416636610244,4.44847348814022,0,0,0.322928853391811,0.603129249281559,0.238744688006273,0.164140899745061,0,0,0,1.65109494370578,0.555583582109135,0,0,0,0,0,0,6.68269432610579,5.69404788446044,4.87966721104437,3.56417624711944,2.71814784818809,1.31017538247707,0.944050424693745,1.07449492442937,2.87931536182433,0,0,0,2.24274819065968,1.82004339502807,2.33341426012857,1.29159823477731,1.520605129417,1.5256441023948,0.911430693907651,0.104859344425711,0,0,0,0.202725215290164,0.513554785824136,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,6.43759264784788,0.448569283047378,0.839423081820392,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,1.59609949360412,2.21953687480374,1.21553358534147,1.25767897576789,1.47074806760011,1.33348036680969,1.03017528619447,2.24643446714271,1.01078884705519,0.760437899670719,1.13175804831646,0.561849044819294,1.15245274328765,1.26358031702349,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0.735994600671987,0.342869252385415,1.06485483695602,0.953744759789284,1.16277133305863,0.941093804153306,1.01537529470012,0.914639864363863,1.05227884575137,0.679020569229309,1.12228454331548,0.711810108745045,0.788035859004508,0.818462086339379,0.464810523557898,0.964533054905707,0.249810577937946,0.701794825336225,0.644613162144895,0.191288332068843,0,0|short_description=p1@Palm3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74337 | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|TSSclassifier=NA | |||
|UniProt=A2TJV2 | |||
|association_with_transcript=0bp_to_ENSMUST00000055077,ENSMUST00000142367,NM_028877,uc009mlq.1,uc012ggy.1_5end | |||
|cluster_id=chr8:86545343..86545374,+ | |||
|description=CAGE_peak_1_at_Palm3_5end | |||
|id=chr8:86545343..86545374,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.56e-07!14;UBERON:0003918!2.56e-07!14;UBERON:0005095!2.56e-07!14;UBERON:0007687!2.56e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,2.62e-11,18;UBERON:0002113,5.27e-11,14;UBERON:0003918,5.27e-11,14;UBERON:0011143,5.27e-11,14;UBERON:0005095,5.27e-11,14;UBERON:0007687,5.27e-11,14;UBERON:0001008,1.70e-10,19 | |||
|phase1_expression=10.7299727560212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,4.64783285263046,0,0,0,0,0.506719730950197,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,1.15307748628029,0,0.117588707135705,0.125666591329675,3.70792451601561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.248813941220186,0,0,1.82168620147785,0.229902104433473,0.360124259610698,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,2.37124792226126,1.32374256117473,2.28736461413134,1.09597866213787,1.94633074457919,0.696504333044333,2.26360350048738,3.78165106955137,0,0,0,1.24275463521301,0.703578179943289,0,0.710234206755631,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,10.4511242762265,13.9342003116263,10.9537342123779,4.23535401709019,1.77902435075896,0.951128130562796,0,0,0.251335208800269,0,0,0,0,0,6.2590407314517,11.3106027483632,18.0332377076929,20.1614814566861,18.0375813065892,13.6764848786121,13.7223285559638,8.41377843483732,10.9899109488962,9.13139013021324,0,0.500535317148282,0.589676985339609,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.89491411770485,4.07412441105065,3.05541154395339,5.63256595892405,5.3602002381381,1.42826184531608,0.780534591431195,0.630540576424764,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78065603667255,1.79175655288934,0.164970122972535,1.32745138339963,1.69946445308487,1.81394134178851,0.377210159511796,0.885905678642318,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0,3.06103859853227,2.19909762430683,0.428674070063185,0.354680467284547,0.356737635204141,0.658196082408484,0,7.74416636610244,4.44847348814022,0,0,0.322928853391811,0.603129249281559,0.238744688006273,0.164140899745061,0,0,0,1.65109494370578,0.555583582109135,0,0,0,0,0,0,6.68269432610579,5.69404788446044,4.87966721104437,3.56417624711944,2.71814784818809,1.31017538247707,0.944050424693745,1.07449492442937,2.87931536182433,0,0,0,2.24274819065968,1.82004339502807,2.33341426012857,1.29159823477731,1.520605129417,1.5256441023948,0.911430693907651,0.104859344425711,0,0,0,0.202725215290164,0.513554785824136,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,6.43759264784788,0.448569283047378,0.839423081820392,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,1.59609949360412,2.21953687480374,1.21553358534147,1.25767897576789,1.47074806760011,1.33348036680969,1.03017528619447,2.24643446714271,1.01078884705519,0.760437899670719,1.13175804831646,0.561849044819294,1.15245274328765,1.26358031702349,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0.735994600671987,0.342869252385415,1.06485483695602,0.953744759789284,1.16277133305863,0.941093804153306,1.01537529470012,0.914639864363863,1.05227884575137,0.679020569229309,1.12228454331548,0.711810108745045,0.788035859004508,0.818462086339379,0.464810523557898,0.964533054905707,0.249810577937946,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p1@Palm3 | |||
}} |
Latest revision as of 21:01, 25 September 2015
Short description: | p1@Palm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Palm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | 0bp_to_ENSMUST00000055077, ENSMUST00000142367, NM_028877, uc009mlq.1, uc012ggy.1_5end |
EntrezGene: | Palm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 2.62e-11 | 18 |
kidney | 5.27e-11 | 14 |
kidney mesenchyme | 5.27e-11 | 14 |
upper urinary tract | 5.27e-11 | 14 |
kidney rudiment | 5.27e-11 | 14 |
kidney field | 5.27e-11 | 14 |
renal system | 1.70e-10 | 19 |