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UBERON:0006554

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Name:urinary system structure
Namespace:FANTOM
Xrefs:
links:
SCTID:122489005
Comments:editor note: note that we do not explicitly exclude entities such as WBbt:0005777 (excretory duct) here, but they will be automatically classified under this class after reasoning

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000061(anatomical structure)
part_of:UBERON:0001008(renal system)



Children

is a:UBERON:0000057 (urethra),UBERON:0000074 (renal glomerulus),UBERON:0000163 (embryonic cloaca),UBERON:0000365 (urothelium),UBERON:0001225 (cortex of kidney),UBERON:0001229 (renal corpuscle),UBERON:0001230 (glomerular capsule),UBERON:0001255 (urinary bladder),UBERON:0001256 (wall of urinary bladder),UBERON:0001259 (mucosa of urinary bladder),UBERON:0001285 (nephron),UBERON:0001556 (lower urinary tract),UBERON:0002113 (kidney),UBERON:0002303 (juxtaglomerular apparatus),UBERON:0002319 (mesangium),UBERON:0002321 (extraglomerular mesangium),UBERON:0004819 (kidney epithelium),UBERON:0005215 (kidney interstitium),UBERON:0005749 (glomerular tuft),UBERON:0006555 (excretory tube),UBERON:0008987 (renal parenchyma),UBERON:0009846 (embryonic cloacal epithelium),UBERON:0011143 (upper urinary tract)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006554 (urinary system structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data