FFCP PHASE1:Mm9::chr3:92425160..92425170,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=78382|HGNC=|MCL_coexpression_id=71|UniProt=D3YV94|association_with_transcript=173bp_to_ENSMUST00000170676_5end|description=CAGE_peak_4_at_Lce6a_5end|id=chr3:92425160..92425170,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!3.32e-16!5;UBERON:0001003!3.32e-16!5;UBERON:0002097!3.32e-16!5;UBERON:0002199!3.32e-16!5;UBERON:0007029!3.32e-16!5;UBERON:0007376!3.32e-16!5;UBERON:0002416!3.32e-16!5;UBERON:0007383!3.32e-16!5;UBERON:0003102!8.41e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.85e-40,5;UBERON:0001003,5.85e-40,5;UBERON:0002097,5.85e-40,5;UBERON:0002199,5.85e-40,5;UBERON:0007029,5.85e-40,5;UBERON:0007376,5.85e-40,5;UBERON:0002416,5.85e-40,5;UBERON:0007383,5.85e-40,5;UBERON:0003102,1.17e-20,22;UBERON:0002102,3.21e-08,7;UBERON:0004710,3.21e-08,7;UBERON:0005419,3.21e-08,7;UBERON:0005417,3.21e-08,7;UBERON:0005729,3.21e-08,7;UBERON:0010708,2.64e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,1.74126083261083,4.93877127379064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,1.93757312035087,1.02531972377865,1.43246812803764,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,1.54325288784913,0.749431733813838,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0|short_description=p4@Lce6a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78382 | |||
|HGNC= | |||
|MCL_coexpression_id=71 | |||
|TSSclassifier=NA | |||
|UniProt=D3YV94 | |||
|association_with_transcript=173bp_to_ENSMUST00000170676_5end | |||
|cluster_id=chr3:92425160..92425170,- | |||
|description=CAGE_peak_4_at_Lce6a_5end | |||
|id=chr3:92425160..92425170,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.32e-16!5;UBERON:0001003!3.32e-16!5;UBERON:0002097!3.32e-16!5;UBERON:0002199!3.32e-16!5;UBERON:0007029!3.32e-16!5;UBERON:0007376!3.32e-16!5;UBERON:0002416!3.32e-16!5;UBERON:0007383!3.32e-16!5;UBERON:0003102!8.41e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.85e-40,5;UBERON:0001003,5.85e-40,5;UBERON:0002097,5.85e-40,5;UBERON:0002199,5.85e-40,5;UBERON:0007029,5.85e-40,5;UBERON:0007376,5.85e-40,5;UBERON:0002416,5.85e-40,5;UBERON:0007383,5.85e-40,5;UBERON:0003102,1.17e-20,22;UBERON:0002102,3.21e-08,7;UBERON:0004710,3.21e-08,7;UBERON:0005419,3.21e-08,7;UBERON:0005417,3.21e-08,7;UBERON:0005729,3.21e-08,7;UBERON:0010708,2.64e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,1.74126083261083,4.93877127379064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,1.93757312035087,1.02531972377865,1.43246812803764,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,1.54325288784913,0.749431733813838,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@Lce6a | |||
}} |
Latest revision as of 21:59, 25 September 2015
Short description: | p4@Lce6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lce6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:71 |
Association with transcript: | 173bp_to_ENSMUST00000170676_5end |
EntrezGene: | Lce6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 5.85e-40 | 5 |
skin epidermis | 5.85e-40 | 5 |
skin of body | 5.85e-40 | 5 |
integument | 5.85e-40 | 5 |
surface | 5.85e-40 | 5 |
outer epithelium | 5.85e-40 | 5 |
integumental system | 5.85e-40 | 5 |
enveloping layer of ectoderm | 5.85e-40 | 5 |
surface structure | 1.17e-20 | 22 |
forelimb | 3.21e-08 | 7 |
pectoral appendage | 3.21e-08 | 7 |
pectoral appendage bud | 3.21e-08 | 7 |
forelimb bud | 3.21e-08 | 7 |
forelimb/pectoral fin field | 3.21e-08 | 7 |
pectoral complex | 2.64e-07 | 8 |