FFCP PHASE1:Mm9::chr2:163332558..163332596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15378 | |EntrezGene=15378 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1512 | |MCL_coexpression_id=1512 | ||
|TSSclassifier=NA | |||
|UniProt=A2A5I4 | |UniProt=A2A5I4 | ||
|association_with_transcript=14bp_to_ENSMUST00000143911_5end | |association_with_transcript=14bp_to_ENSMUST00000143911_5end | ||
|cluster_id=chr2:163332558..163332596,+ | |||
|description=CAGE_peak_2_at_Hnf4a_5end | |description=CAGE_peak_2_at_Hnf4a_5end | ||
|id=chr2:163332558..163332596,+ | |id=chr2:163332558..163332596,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.05e-08!9;CL:0002251!1.05e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.05e-08!9;CL:0002251!1.05e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.40e-10,9;CL:0002251,5.40e-10,9;CL:0000239,8.69e-07,6;CL:0000677,8.69e-07,6;CL:0000584,8.69e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.22e-37!59;UBERON:0000160!6.66e-33!43;UBERON:0001007!3.75e-20!128;UBERON:0001555!3.75e-20!128;UBERON:0007026!3.75e-20!128;UBERON:0004119!3.98e-20!130;UBERON:0000925!3.98e-20!130;UBERON:0006595!3.98e-20!130;UBERON:0004921!1.13e-18!126;UBERON:0004185!1.13e-18!126;UBERON:0000344!8.79e-14!15;UBERON:0001242!4.77e-12!13;UBERON:0000060!4.77e-12!13;UBERON:0001262!4.77e-12!13;UBERON:0004786!4.77e-12!13;UBERON:0002108!1.08e-11!16;UBERON:0004923!1.50e-10!24;UBERON:0001045!2.42e-09!13;UBERON:0003350!1.05e-08!9;UBERON:0004808!1.05e-08!9;UBERON:0001277!1.05e-08!9;UBERON:0001264!1.80e-08!12;UBERON:0003922!1.80e-08!12;UBERON:0002114!1.80e-08!12;UBERON:0003923!1.80e-08!12;UBERON:0003924!1.80e-08!12;UBERON:0003921!1.80e-08!12 | |ontology_enrichment_uberon=UBERON:0005409!2.22e-37!59;UBERON:0000160!6.66e-33!43;UBERON:0001007!3.75e-20!128;UBERON:0001555!3.75e-20!128;UBERON:0007026!3.75e-20!128;UBERON:0004119!3.98e-20!130;UBERON:0000925!3.98e-20!130;UBERON:0006595!3.98e-20!130;UBERON:0004921!1.13e-18!126;UBERON:0004185!1.13e-18!126;UBERON:0000344!8.79e-14!15;UBERON:0001242!4.77e-12!13;UBERON:0000060!4.77e-12!13;UBERON:0001262!4.77e-12!13;UBERON:0004786!4.77e-12!13;UBERON:0002108!1.08e-11!16;UBERON:0004923!1.50e-10!24;UBERON:0001045!2.42e-09!13;UBERON:0003350!1.05e-08!9;UBERON:0004808!1.05e-08!9;UBERON:0001277!1.05e-08!9;UBERON:0001264!1.80e-08!12;UBERON:0003922!1.80e-08!12;UBERON:0002114!1.80e-08!12;UBERON:0003923!1.80e-08!12;UBERON:0003924!1.80e-08!12;UBERON:0003921!1.80e-08!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.01e-32,47;UBERON:0000160,3.52e-29,31;UBERON:0000344,5.50e-16,15;UBERON:0001242,6.13e-14,13;UBERON:0001262,6.13e-14,13;UBERON:0004786,6.13e-14,13;UBERON:0004119,1.43e-12,118;UBERON:0000925,1.43e-12,118;UBERON:0006595,1.43e-12,118;UBERON:0001007,1.63e-12,116;UBERON:0001555,1.63e-12,116;UBERON:0007026,1.63e-12,116;UBERON:0004921,3.11e-11,114;UBERON:0004923,5.10e-11,24;UBERON:0003350,5.40e-10,9;UBERON:0004808,5.40e-10,9;UBERON:0001277,5.40e-10,9;UBERON:0001264,1.02e-09,12;UBERON:0000485,1.25e-07,11 | |||
|phase1_expression=0,34.1995899486574,42.7699285026164,31.4562779759103,18.0322462780685,169.222306087185,174.508642524858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,79.5162341283231,77.9991555628378,52.2551087344668,75.3833493278381,97.8239396393936,76.9594848798314,64.2676830887823,83.3706720063946,0,0,0,139.226480720114,145.954018624756,149.043630071529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148505706638,0,4.0798280022465,0,0.649776417447669,0.896053774194671,4.63466586434781,0,0,0,0,0,0,0,0,0,0,12.5602267690966,0,0,0,0.304465478312141,0.691846491768175,0,0.352766121407114,0,8.15743393523434,0,0,0,0,0,109.971139118692,0,0,72.2943466240314,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.3529698224032,56.856871832662,5.75878276445132,10.6828869055802,39.1757082419164,31.0592627919947,27.7972554806088,23.2075263857322,61.6887780007865,17.4580892007452,30.4115602648326,25.2674719492262,31.7791462004166,65.6138168317582,61.1670681145385,63.3269248948888,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,4.83850806576673,3.14494392181125,5.17182858485164,4.66578279193557,5.788251834058,7.89340140522401,10.64475708568,5.0261920300261,0.823684239564244,0,0.744281895337007,1.5601883655728,0.757736633841335,1.07638448113147,0.482443521363367,0,0,0.488894929326078,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,33.1862845849907,13.8384962608339,22.3719432153916,22.6326095707078,29.2348873951965,28.2840336108413,18.3484088149437,15.6319503675327,24.9548164869305,16.1178746547266,22.1379078007497,23.721174947083,0,0,0,0,0,0,0,0,0,1.69465656691056,0,0,0,0,0,0.656563598980245,51.3006272468537,0,0,2.68302928352189,0.185194527369712,0,0.136694227721025,0,0,0,0,87.8296968573904,4.27053591334533,12.8091264289915,16.848833168201,19.0270349373167,29.9156712332263,23.6012606173436,32.8960753786837,46.3308017311732,57.8082780881396,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,1.19513524027894,0.972426868273176,2.30574478890781,3.49302666055027,1.33348036680969,3.91466608753899,3.20919209591815,2.27427490587418,2.78827229879264,2.82939512079114,1.68554713445788,2.75308155340938,1.89537047553524,0.476293691283074,2.20180219295225,1.73618298417335,3.70877310722976,2.06078488188156,1.37147700954166,2.30718548007139,2.62279808942053,2.61623549938191,2.35273451038327,2.36920902096694,2.19513567447327,2.36762740294059,2.17286582153379,1.68342681497322,1.30498519936592,1.97008964751127,1.63692417267876,1.70430525304563,1.92906610981141,0,3.50897412668113,2.79332370262788,0.382576664137687,0,0 | |phase1_expression=0,34.1995899486574,42.7699285026164,31.4562779759103,18.0322462780685,169.222306087185,174.508642524858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,79.5162341283231,77.9991555628378,52.2551087344668,75.3833493278381,97.8239396393936,76.9594848798314,64.2676830887823,83.3706720063946,0,0,0,139.226480720114,145.954018624756,149.043630071529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148505706638,0,4.0798280022465,0,0.649776417447669,0.896053774194671,4.63466586434781,0,0,0,0,0,0,0,0,0,0,12.5602267690966,0,0,0,0.304465478312141,0.691846491768175,0,0.352766121407114,0,8.15743393523434,0,0,0,0,0,109.971139118692,0,0,72.2943466240314,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.3529698224032,56.856871832662,5.75878276445132,10.6828869055802,39.1757082419164,31.0592627919947,27.7972554806088,23.2075263857322,61.6887780007865,17.4580892007452,30.4115602648326,25.2674719492262,31.7791462004166,65.6138168317582,61.1670681145385,63.3269248948888,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,4.83850806576673,3.14494392181125,5.17182858485164,4.66578279193557,5.788251834058,7.89340140522401,10.64475708568,5.0261920300261,0.823684239564244,0,0.744281895337007,1.5601883655728,0.757736633841335,1.07638448113147,0.482443521363367,0,0,0.488894929326078,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,33.1862845849907,13.8384962608339,22.3719432153916,22.6326095707078,29.2348873951965,28.2840336108413,18.3484088149437,15.6319503675327,24.9548164869305,16.1178746547266,22.1379078007497,23.721174947083,0,0,0,0,0,0,0,0,0,1.69465656691056,0,0,0,0,0,0.656563598980245,51.3006272468537,0,0,2.68302928352189,0.185194527369712,0,0.136694227721025,0,0,0,0,87.8296968573904,4.27053591334533,12.8091264289915,16.848833168201,19.0270349373167,29.9156712332263,23.6012606173436,32.8960753786837,46.3308017311732,57.8082780881396,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,1.19513524027894,0.972426868273176,2.30574478890781,3.49302666055027,1.33348036680969,3.91466608753899,3.20919209591815,2.27427490587418,2.78827229879264,2.82939512079114,1.68554713445788,2.75308155340938,1.89537047553524,0.476293691283074,2.20180219295225,1.73618298417335,3.70877310722976,2.06078488188156,1.37147700954166,2.30718548007139,2.62279808942053,2.61623549938191,2.35273451038327,2.36920902096694,2.19513567447327,2.36762740294059,2.17286582153379,1.68342681497322,1.30498519936592,1.97008964751127,1.63692417267876,1.70430525304563,1.92906610981141,0,3.50897412668113,2.79332370262788,0.382576664137687,0,0 | ||
|short_description=p2@Hnf4a | |short_description=p2@Hnf4a | ||
}} | }} |
Latest revision as of 02:05, 26 September 2015
Short description: | p2@Hnf4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hnf4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1512 |
Association with transcript: | 14bp_to_ENSMUST00000143911_5end |
EntrezGene: | Hnf4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.40e-10 | 9 |
epithelial cell of alimentary canal | 5.40e-10 | 9 |
brush border epithelial cell | 8.69e-07 | 6 |
gut absorptive cell | 8.69e-07 | 6 |
enterocyte | 8.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.01e-32 | 47 |
intestine | 3.52e-29 | 31 |
mucosa | 5.50e-16 | 15 |
intestinal mucosa | 6.13e-14 | 13 |
wall of intestine | 6.13e-14 | 13 |
gastrointestinal system mucosa | 6.13e-14 | 13 |
endoderm-derived structure | 1.43e-12 | 118 |
endoderm | 1.43e-12 | 118 |
presumptive endoderm | 1.43e-12 | 118 |
digestive system | 1.63e-12 | 116 |
digestive tract | 1.63e-12 | 116 |
primitive gut | 1.63e-12 | 116 |
subdivision of digestive tract | 3.11e-11 | 114 |
organ component layer | 5.10e-11 | 24 |
epithelium of mucosa | 5.40e-10 | 9 |
gastrointestinal system epithelium | 5.40e-10 | 9 |
intestinal epithelium | 5.40e-10 | 9 |
pancreas | 1.02e-09 | 12 |
simple columnar epithelium | 1.25e-07 | 11 |