Personal tools

FFCP PHASE1:Mm9::chr17:26232382..26232394,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56520
|EntrezGene=56520
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=23bp_to_ENSMUST00000150280_5end
|association_with_transcript=23bp_to_ENSMUST00000150280_5end
|cluster_id=chr17:26232382..26232394,-
|description=CAGE_peak_3_at_Nme4_5end
|description=CAGE_peak_3_at_Nme4_5end
|id=chr17:26232382..26232394,-
|id=chr17:26232382..26232394,-
|ontology_enrichment_celltype=CL:0000219!2.74e-09!54;CL:0002320!9.36e-08!46;CL:0000134!9.36e-08!46;CL:0000034!8.24e-07!97
|ontology_enrichment_celltype=CL:0000219!2.74e-09!54;CL:0002320!9.36e-08!46;CL:0000134!9.36e-08!46;CL:0000034!8.24e-07!97
|ontology_enrichment_celltype_v019_2=CL:0000219,1.93e-10,54;CL:0002320,1.51e-08,46;CL:0000134,1.51e-08,46;CL:0000034,7.64e-08,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!9.36e-08!46
|ontology_enrichment_uberon=UBERON:0002384!9.36e-08!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.51e-08,46
|phase1_expression=1.44133962394315,0,0,0.60492842261366,1.50268718983904,0.16787927191189,0.934450562382103,1.54947988129892,2.67498572088167,5.14941957908386,1.88339765048055,0.638177271962691,2.9104124088305,1.48614684112296,2.99798785634096,0.202475267389826,0,1.26184866143295,1.64537320326887,1.69755860719212,0.17008658030214,0.794327609607082,2.61199789138935,0.799962113967033,0.68822784320151,0,0,0,0.950117097281869,0.252030129759931,0,1.90509202037889,1.23012957516914,0,0.577703239502549,0.997407872150954,0.816677425049476,0,0,0.523523743973798,0,0,0,1.00717454380462,0.811015449756117,1.46837401729345,3.9119567217402,3.2703773457067,2.63623419281366,2.91644848611425,1.67983705950435,1.43752564364972,1.51004345451963,9.42970784614748,3.36093799142464,1.02903774414379,1.14613375975503,3.6097046459421,1.01158230429799,0,1.90149421051854,6.43804610931351,4.4464739805557,3.5995988691256,1.97773272513395,2.8419204597844,3.29560121570245,3.45796474789399,1.34796496001021,1.08004750665353,1.26194976810829,0.285650984403804,0.441737081903227,0.734944795289724,0.575072826109418,2.75765635983006,0,0.383062014255563,0.307213066512487,0.131886287730194,0.457438218012048,0.52091337055676,0,0,0.45839474333043,0.589257170947335,0.569486723196412,0.186399445825301,0.227178579999552,0.529000920747499,0.579728977403356,3.44169550792555,0.679971333707751,1.07940638327563,1.29955283489534,0.448026887097336,0.561777680527007,1.02258193546835,1.81850203222008,3.88673531961374,0.845060518660083,0,0,0,0.649473123033642,0.253359865475099,3.53867111510348,0.34255163915718,0.517875767294343,0.445326417194474,1.21439728736295,0.913396434936424,0.461230994512117,0.753613202763113,0.352766121407114,0.125666591329675,0.494389935468748,0,0,0.970601099684455,0.883366073841574,0.969750506270444,0,0.292780797011547,0,0.255457055208591,1.1981512450592,1.19980546198682,1.01656181658452,0.449371918214468,0.915001205637253,0.251308704225729,0.173824320192276,0,0.62336413367868,0.162241263067758,1.42575109390443,0.622034853050465,0.758168275301024,1.26265113531884,2.34216797332867,3.67843367093557,1.80062129805349,1.05493372485001,0.816437989815934,0.768682321709099,0.843315521037559,0.258703370739016,2.37124792226126,1.51284864134255,2.46331573829528,3.28793598641362,1.94633074457919,0.696504333044333,1.64625709126355,3.38358253591438,0.702213187313235,0.51469581422943,0.568326998791185,1.65700618028402,1.17263029990548,1.62055855314913,0.946978942340841,0.983821158737019,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.658650345873152,0.134206418760372,0.210289948564127,0.617427674275707,0,0,3.19932375802851,0.928946687441754,1.03093969057675,1.00841762311671,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,3.03468641524931,1.14248512609729,3.38123207019241,1.22190796707189,2.13347735884388,0.631222379012867,0.189709611372772,0,0.156998727841375,0.740382983530803,0,1.00107063429656,0.589676985339609,0.899448449539415,0.202860121388503,0.482354319504834,0,0.863088412352432,0.648540907100142,0.823684239564244,0,0,0.624075346229121,0.505157755894224,0.538192240565737,0,0.554259570499814,2.27389694124582,1.14075483509418,1.35796068620151,1.40814148973101,1.00503754465089,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0,0.433947175744535,1.50791283939272,0.54390568381871,0,0.827810238914197,0.321101179975584,0.234423373184406,3.77050374366353,0.252470927204373,2.2085575359138,1.17131623288992,1.50796378412959,1.91175038362042,1.11399337041197,1.69845918473299,1.21443210502468,1.75353514746787,2.76701444562566,0.321321316421807,0.567760340833074,3.5613120733451,1.46598263418218,1.31976098378028,0,2.91336763385978,1.81394134178851,2.07465587731488,1.47650946440386,1.53717573971964,0.516856586336442,1.81766864738753,2.13898427030833,0.948110273807448,2.10837217149998,0,0,2.34079422240703,1.4229455216103,1.07168517515796,1.41872186913819,2.14042581122485,0.658196082408484,1.522324745573,0.704015124191131,0,0.661585194164886,0.16488625294148,1.45317984026315,0.542816324353403,0.119372344003136,0.164140899745061,0,0,0.170870880797853,1.65109494370578,0.740778109478847,0.753473828018764,1.0935538217682,0,2.71965487990169,2.09927178485487,2.21119958087078,1.90934123603023,1.89801596148681,1.01659733563424,1.18805874903981,1.04544148007234,1.31017538247707,0.404593039154462,0.165306911450672,0.26175594198403,0.388844919875379,0.621339313086926,0,1.49516546043979,1.98550188548517,2.13896307178452,1.16243841129958,1.18269287843545,1.17357238645754,0.781226309063701,1.15345278868282,0.241584120826006,0.576060012515731,0,1.41907650703115,1.02710957164827,1.29920822977795,0.716106782669926,0,0.240390899039938,0.738447635872886,0.302899349844443,0.381034033274999,0.201652370273681,0.38983152295901,0.288635524920988,0.350630706544707,0.906921534460845,1.77588762699252,1.88399098879899,2.01461539636894,1.15913756419314,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0.51776031175182,2.07574695168353,1.99512436700516,1.70733605754134,1.70174701947806,1.25767897576789,3.49302666055027,1.55572709461131,0.412070114477788,1.28367683836726,1.26348605881899,1.52087579934144,1.32038438970253,1.12369808963859,0.89635213366817,0.689225627467359,0,0.927074607558844,0.578727661391115,1.64834360321323,1.91358596174717,1.02860775715625,1.24233064311536,1.66905332963125,0.581385666529314,0.752875043322645,0.930760686808441,1.46342378298218,1.8414879800649,1.49384525230448,1.12228454331548,1.42362021749009,0.985044823755635,0.818462086339379,1.39443157067369,0.771626443924566,1.74867404556562,0.935726433781634,0.214871054048298,1.14772999241306,0.220591419119515,0.695603506861264
|phase1_expression=1.44133962394315,0,0,0.60492842261366,1.50268718983904,0.16787927191189,0.934450562382103,1.54947988129892,2.67498572088167,5.14941957908386,1.88339765048055,0.638177271962691,2.9104124088305,1.48614684112296,2.99798785634096,0.202475267389826,0,1.26184866143295,1.64537320326887,1.69755860719212,0.17008658030214,0.794327609607082,2.61199789138935,0.799962113967033,0.68822784320151,0,0,0,0.950117097281869,0.252030129759931,0,1.90509202037889,1.23012957516914,0,0.577703239502549,0.997407872150954,0.816677425049476,0,0,0.523523743973798,0,0,0,1.00717454380462,0.811015449756117,1.46837401729345,3.9119567217402,3.2703773457067,2.63623419281366,2.91644848611425,1.67983705950435,1.43752564364972,1.51004345451963,9.42970784614748,3.36093799142464,1.02903774414379,1.14613375975503,3.6097046459421,1.01158230429799,0,1.90149421051854,6.43804610931351,4.4464739805557,3.5995988691256,1.97773272513395,2.8419204597844,3.29560121570245,3.45796474789399,1.34796496001021,1.08004750665353,1.26194976810829,0.285650984403804,0.441737081903227,0.734944795289724,0.575072826109418,2.75765635983006,0,0.383062014255563,0.307213066512487,0.131886287730194,0.457438218012048,0.52091337055676,0,0,0.45839474333043,0.589257170947335,0.569486723196412,0.186399445825301,0.227178579999552,0.529000920747499,0.579728977403356,3.44169550792555,0.679971333707751,1.07940638327563,1.29955283489534,0.448026887097336,0.561777680527007,1.02258193546835,1.81850203222008,3.88673531961374,0.845060518660083,0,0,0,0.649473123033642,0.253359865475099,3.53867111510348,0.34255163915718,0.517875767294343,0.445326417194474,1.21439728736295,0.913396434936424,0.461230994512117,0.753613202763113,0.352766121407114,0.125666591329675,0.494389935468748,0,0,0.970601099684455,0.883366073841574,0.969750506270444,0,0.292780797011547,0,0.255457055208591,1.1981512450592,1.19980546198682,1.01656181658452,0.449371918214468,0.915001205637253,0.251308704225729,0.173824320192276,0,0.62336413367868,0.162241263067758,1.42575109390443,0.622034853050465,0.758168275301024,1.26265113531884,2.34216797332867,3.67843367093557,1.80062129805349,1.05493372485001,0.816437989815934,0.768682321709099,0.843315521037559,0.258703370739016,2.37124792226126,1.51284864134255,2.46331573829528,3.28793598641362,1.94633074457919,0.696504333044333,1.64625709126355,3.38358253591438,0.702213187313235,0.51469581422943,0.568326998791185,1.65700618028402,1.17263029990548,1.62055855314913,0.946978942340841,0.983821158737019,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.658650345873152,0.134206418760372,0.210289948564127,0.617427674275707,0,0,3.19932375802851,0.928946687441754,1.03093969057675,1.00841762311671,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,3.03468641524931,1.14248512609729,3.38123207019241,1.22190796707189,2.13347735884388,0.631222379012867,0.189709611372772,0,0.156998727841375,0.740382983530803,0,1.00107063429656,0.589676985339609,0.899448449539415,0.202860121388503,0.482354319504834,0,0.863088412352432,0.648540907100142,0.823684239564244,0,0,0.624075346229121,0.505157755894224,0.538192240565737,0,0.554259570499814,2.27389694124582,1.14075483509418,1.35796068620151,1.40814148973101,1.00503754465089,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0,0.433947175744535,1.50791283939272,0.54390568381871,0,0.827810238914197,0.321101179975584,0.234423373184406,3.77050374366353,0.252470927204373,2.2085575359138,1.17131623288992,1.50796378412959,1.91175038362042,1.11399337041197,1.69845918473299,1.21443210502468,1.75353514746787,2.76701444562566,0.321321316421807,0.567760340833074,3.5613120733451,1.46598263418218,1.31976098378028,0,2.91336763385978,1.81394134178851,2.07465587731488,1.47650946440386,1.53717573971964,0.516856586336442,1.81766864738753,2.13898427030833,0.948110273807448,2.10837217149998,0,0,2.34079422240703,1.4229455216103,1.07168517515796,1.41872186913819,2.14042581122485,0.658196082408484,1.522324745573,0.704015124191131,0,0.661585194164886,0.16488625294148,1.45317984026315,0.542816324353403,0.119372344003136,0.164140899745061,0,0,0.170870880797853,1.65109494370578,0.740778109478847,0.753473828018764,1.0935538217682,0,2.71965487990169,2.09927178485487,2.21119958087078,1.90934123603023,1.89801596148681,1.01659733563424,1.18805874903981,1.04544148007234,1.31017538247707,0.404593039154462,0.165306911450672,0.26175594198403,0.388844919875379,0.621339313086926,0,1.49516546043979,1.98550188548517,2.13896307178452,1.16243841129958,1.18269287843545,1.17357238645754,0.781226309063701,1.15345278868282,0.241584120826006,0.576060012515731,0,1.41907650703115,1.02710957164827,1.29920822977795,0.716106782669926,0,0.240390899039938,0.738447635872886,0.302899349844443,0.381034033274999,0.201652370273681,0.38983152295901,0.288635524920988,0.350630706544707,0.906921534460845,1.77588762699252,1.88399098879899,2.01461539636894,1.15913756419314,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0.51776031175182,2.07574695168353,1.99512436700516,1.70733605754134,1.70174701947806,1.25767897576789,3.49302666055027,1.55572709461131,0.412070114477788,1.28367683836726,1.26348605881899,1.52087579934144,1.32038438970253,1.12369808963859,0.89635213366817,0.689225627467359,0,0.927074607558844,0.578727661391115,1.64834360321323,1.91358596174717,1.02860775715625,1.24233064311536,1.66905332963125,0.581385666529314,0.752875043322645,0.930760686808441,1.46342378298218,1.8414879800649,1.49384525230448,1.12228454331548,1.42362021749009,0.985044823755635,0.818462086339379,1.39443157067369,0.771626443924566,1.74867404556562,0.935726433781634,0.214871054048298,1.14772999241306,0.220591419119515,0.695603506861264
|short_description=p3@Nme4
|short_description=p3@Nme4
}}
}}

Latest revision as of 02:47, 26 September 2015

Short description:p3@Nme4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nme4_5end
Coexpression cluster:NA
Association with transcript: 23bp_to_ENSMUST00000150280_5end
EntrezGene:Nme4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nme4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell1.93e-1054
connective tissue cell1.51e-0846
mesenchymal cell1.51e-0846
stem cell7.64e-0897

Uber anatomy
Ontology termp-valuen
connective tissue1.51e-0846
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:26232382..26232394,-&oldid=4228678"